Os01g0602200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0602200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.08 | 0.611 | 11 | 3.5 | 1.52 | -0.414 | -1.34 | 5.01 | 1.05 | 1.66 | 0.4293 | 10666 | -- | -- |
| 171.43 | 0.61 | 11.1 | 3.18 | 1.54 | 0.835 | -1.23 | -- | 1.06 | 1.66 | 1.008 | 13087 | -- | -- |
| 176.09 | 0.618 | 11 | 3.57 | 1.53 | -0.478 | -- | 5.2 | 1.06 | 1.6 | 0.4392 | 10666 | -- | -- |
| 177.78 | 0.621 | 11.1 | 3.17 | 1.57 | 0.864 | -- | -- | 1.13 | 1.59 | 1.095 | 13087 | -- | -- |
| 316.96 | 0.829 | 11 | 3.54 | -- | -0.524 | -- | 5.84 | 1.05 | -- | 0.4115 | 10785 | -- | -- |
| 195.13 | 0.655 | 11.1 | 3.55 | 1.54 | -- | -1.27 | -- | 1.06 | 1.64 | -- | -- | -- | -- |
| 201.53 | 0.665 | 11.1 | 3.59 | 1.54 | -- | -- | -- | 1.07 | 1.59 | -- | -- | -- | -- |
| 320.9 | 0.834 | 11.1 | 3.25 | -- | 0.907 | -- | -- | 1.16 | -- | 1.382 | 15252 | -- | -- |
| 345.81 | 0.866 | 11.1 | -- | 1.62 | 1.78 | -- | -- | 1.07 | 1.77 | 1.589 | 47219 | -- | -- |
| 345.65 | 0.869 | 11.1 | 3.66 | -- | -- | -- | -- | 1.1 | -- | -- | -- | -- | -- |
| 541.91 | 1.09 | 11.2 | -- | 1.6 | -- | -- | -- | 0.668 | 1.66 | -- | -- | -- | -- |
| 505.95 | 1.05 | 11.1 | -- | -- | 1.76 | -- | -- | 1.15 | -- | 1.815 | 47520 | -- | -- |
| 698.13 | 1.23 | 11.2 | -- | -- | -- | -- | -- | 0.696 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.89 | wind | 1e+00 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 2 | 163.42 | wind | 1e+00 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 4 | 164.90 | wind | 1e+00 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 6 | 165.92 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 8 | 10 |
| 11 | 166.24 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 15 | 166.87 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 16 | 166.87 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 18 | 166.94 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 20 | 167.05 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 25 | 167.23 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 26 | 167.25 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 29 | 167.30 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 35 | 167.46 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 40 | 167.50 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 43 | 167.53 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 44 | 167.53 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 49 | 167.60 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 64 | 167.69 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 65 | 167.69 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 8 | 10 |
| 66 | 167.70 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 71 | 167.72 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 10 | 11 |
| 87 | 167.78 | atmosphere | 1e+03 | 14400 | > th | dose independent | sin | 22 | NA |
| 127 | 167.89 | atmosphere | 1e+03 | 14400 | < th | dose independent | sin | 22 | NA |
| 134 | 167.92 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 145 | 167.95 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 340 | 168.26 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 19 | 22 |
| 376 | 168.29 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 377 | 168.30 | atmosphere | 1e+03 | 14400 | > th | dose independent | no | NA | NA |
| 381 | 168.30 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 384 | 168.31 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 390 | 168.31 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 19 | 22 |
| 471 | 168.38 | atmosphere | 1e+03 | 14400 | < th | dose independent | no | NA | NA |
| 474 | 168.38 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 515 | 168.46 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 535 | 168.52 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 552 | 168.54 | radiation | 4e+01 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 560 | 168.56 | radiation | 4e+01 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 770 | 168.93 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 771 | 168.93 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 865 | 169.18 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 914 | 169.32 | atmosphere | 1e+03 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 974 | 169.56 | atmosphere | 1e+03 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 999 | 169.60 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 5 | 4 |