Os01g0601200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ser Thr specific protein kinase-like protein.
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Os01g0601200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ser Thr specific protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.82 | 0.55 | 7.48 | 0.451 | 0.238 | -1.15 | -0.681 | -0.983 | -0.633 | 11.3 | 21.21 | 861 | -- | -- |
| 139.09 | 0.549 | 7.45 | 0.671 | 0.241 | -1.07 | -0.424 | -- | -0.579 | 11.6 | 21.38 | 830 | -- | -- |
| 138.58 | 0.548 | 7.47 | 0.482 | 0.251 | -1.13 | -- | -0.697 | -0.623 | 11.4 | 21.28 | 858 | -- | -- |
| 139.88 | 0.551 | 7.45 | 0.653 | 0.241 | -1.07 | -- | -- | -0.58 | 11.4 | 21.35 | 832 | -- | -- |
| 141.98 | 0.555 | 7.48 | 0.502 | -- | -1.2 | -- | -0.695 | -0.599 | -- | 21.3 | 860 | -- | -- |
| 177.6 | 0.625 | 7.51 | 0.279 | 0.428 | -- | -0.5 | -- | -0.873 | 11.1 | -- | -- | -- | -- |
| 178.64 | 0.626 | 7.52 | 0.258 | 0.431 | -- | -- | -- | -0.875 | 10.9 | -- | -- | -- | -- |
| 143.34 | 0.558 | 7.46 | 0.675 | -- | -1.15 | -- | -- | -0.563 | -- | 21.31 | 833 | -- | -- |
| 147.79 | 0.566 | 7.47 | -- | 0.269 | -0.852 | -- | -- | -0.658 | 11.5 | 22.06 | 764 | -- | -- |
| 190.2 | 0.644 | 7.53 | 0.248 | -- | -- | -- | -- | -0.878 | -- | -- | -- | -- | -- |
| 180.39 | 0.628 | 7.52 | -- | 0.429 | -- | -- | -- | -0.904 | 10.9 | -- | -- | -- | -- |
| 152.05 | 0.574 | 7.47 | -- | -- | -0.919 | -- | -- | -0.644 | -- | 22.02 | 794 | -- | -- |
| 191.82 | 0.646 | 7.53 | -- | -- | -- | -- | -- | -0.905 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.04 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 3 | 128.55 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 4 | 128.96 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 5 | 128.97 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 13 | 130.15 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 21 | 131.17 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 23 | 131.27 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 27 | 131.47 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 44 | 132.95 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 66 | 136.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 78 | 137.56 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 20 |
| 80 | 137.71 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 81 | 137.72 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 84 | 137.87 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 103 | 139.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 105 | 139.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 111 | 139.52 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 114 | 139.57 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 122 | 139.85 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 130 | 140.10 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 132 | 140.19 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 157 | 140.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 158 | 140.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 162 | 140.96 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 164 | 141.01 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 181 | 141.50 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 184 | 141.58 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 186 | 141.65 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 187 | 141.66 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 190 | 141.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 191 | 141.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 192 | 141.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 196 | 141.83 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 240 | 142.65 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 251 | 142.85 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 283 | 143.43 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 300 | 143.65 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 304 | 143.73 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 308 | 143.78 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 317 | 143.91 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 23 |
| 319 | 143.94 | temperature | 20.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 325 | 143.98 | temperature | 25.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 334 | 144.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 338 | 144.05 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 344 | 144.14 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 367 | 144.23 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 387 | 144.34 | wind | 9.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 394 | 144.37 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 402 | 144.41 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 19 |
| 407 | 144.44 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 23 |
| 413 | 144.46 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 22 |
| 506 | 144.84 | temperature | 20.0 | 720 | > th | dose independent | sin | 10 | NA |
| 513 | 144.85 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 515 | 144.86 | temperature | 20.0 | 720 | < th | dose independent | rect. | 18 | 18 |
| 532 | 144.91 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 537 | 144.93 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 592 | 145.13 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 597 | 145.15 | temperature | 20.0 | 720 | > th | dose independent | rect. | 11 | 20 |
| 599 | 145.16 | temperature | 20.0 | 720 | < th | dose independent | sin | 10 | NA |
| 623 | 145.22 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 661 | 145.36 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 23 |
| 690 | 145.44 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 714 | 145.53 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 732 | 145.57 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 773 | 145.73 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 23 |
| 789 | 145.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 803 | 145.81 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 812 | 145.85 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 826 | 145.90 | temperature | 20.0 | 720 | < th | dose independent | no | NA | NA |
| 873 | 146.01 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 882 | 146.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 907 | 146.14 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 910 | 146.17 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 946 | 146.27 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 950 | 146.27 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 954 | 146.29 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 971 | 146.36 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 23 |