Os01g0594300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pistil-specific extensin-like protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0594300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Pistil-specific extensin-like protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.88 | 0.644 | 3.12 | -0.0279 | 0.157 | 3.58 | -0.757 | -2.29 | -0.0236 | 9.49 | 76.98 | 187 | 0.92 | 5.95 |
| 187.71 | 0.638 | 3.12 | -0.0115 | 0.158 | 3.86 | -0.759 | -- | -0.0247 | 9.5 | 76.84 | 179 | 1.03 | 5.97 |
| 189.92 | 0.642 | 3.12 | -0.0516 | 0.158 | 3.54 | -- | -2.03 | -0.0241 | 9.89 | 76.94 | 184 | 0.941 | 5.97 |
| 189.71 | 0.641 | 3.12 | -0.0415 | 0.16 | 4.01 | -- | -- | -0.0197 | 9.91 | 76.9 | 176 | 1.07 | 5.93 |
| 191.4 | 0.644 | 3.12 | -0.062 | -- | 3.5 | -- | -1.74 | -0.0219 | -- | 76.92 | 183 | 0.95 | 5.97 |
| 214.2 | 0.686 | 3.13 | -0.0387 | 0.191 | -- | -0.993 | -- | -0.053 | 8.98 | -- | -- | -- | -- |
| 217.56 | 0.691 | 3.13 | -0.0737 | 0.197 | -- | -- | -- | -0.0542 | 8.61 | -- | -- | -- | -- |
| 191.15 | 0.644 | 3.13 | -0.0413 | -- | 4.12 | -- | -- | -0.0244 | -- | 77 | 171 | 1.12 | 5.91 |
| 189.7 | 0.641 | 3.12 | -- | 0.164 | 4.18 | -- | -- | -0.0216 | 9.77 | 76.93 | 168 | 1.14 | 5.88 |
| 219.75 | 0.693 | 3.13 | -0.0731 | -- | -- | -- | -- | -0.0524 | -- | -- | -- | -- | -- |
| 217.71 | 0.69 | 3.12 | -- | 0.197 | -- | -- | -- | -0.046 | 8.63 | -- | -- | -- | -- |
| 191.03 | 0.644 | 3.12 | -- | -- | 4.07 | -- | -- | -0.0179 | -- | 77 | 168 | 1.23 | 5.78 |
| 219.89 | 0.692 | 3.13 | -- | -- | -- | -- | -- | -0.0443 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.30 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 6 | 194.29 | humidity | 80.0 | 90 | < th | dose independent | rect. | 24 | 8 |
| 8 | 194.54 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 17 | 195.11 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 20 | 195.21 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 21 | 11 |
| 44 | 197.59 | humidity | 80.0 | 10 | < th | dose independent | rect. | 22 | 10 |
| 45 | 197.92 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 105 | 197.92 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 188 | 198.80 | radiation | 30.0 | 30 | > th | dose independent | rect. | 7 | 2 |
| 239 | 199.02 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 7 | 2 |
| 365 | 199.32 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 18 | 14 |
| 386 | 199.38 | humidity | 70.0 | 30 | < th | dose independent | rect. | 18 | 14 |
| 618 | 201.66 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 624 | 201.82 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 625 | 201.85 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 711 | 203.24 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 727 | 203.33 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 801 | 204.36 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 804 | 204.41 | radiation | 30.0 | 10 | < th | dose independent | sin | 10 | NA |
| 818 | 204.59 | humidity | 80.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 822 | 204.59 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 846 | 204.80 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 864 | 205.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 869 | 205.07 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 876 | 205.25 | humidity | 80.0 | 30 | < th | dose independent | sin | 8 | NA |
| 951 | 205.63 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 953 | 205.64 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 12 | 21 |
| 954 | 205.65 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 962 | 205.74 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 963 | 205.75 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 965 | 205.78 | radiation | 20.0 | 10 | > th | dose independent | sin | 10 | NA |
| 966 | 205.78 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 970 | 205.83 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 971 | 205.83 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 973 | 205.84 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 982 | 205.93 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 983 | 205.93 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 991 | 205.99 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 996 | 206.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 998 | 206.00 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 999 | 206.00 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |