Os01g0593200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF581 family protein.
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Os01g0593200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF581 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.65 | 0.51 | 11.5 | -1.29 | 1.47 | -1.94 | 1.14 | 7.89 | -0.945 | 2.18 | 25.93 | 149 | -- | -- |
| 130.96 | 0.533 | 11.6 | -2.12 | 1.58 | -1.26 | 0.397 | -- | -1.12 | 1.87 | 25.6 | 245 | -- | -- |
| 121.06 | 0.512 | 11.5 | -1.34 | 1.49 | -2.07 | -- | 7.92 | -0.986 | 1.91 | 26.4 | 209 | -- | -- |
| 131.52 | 0.534 | 11.6 | -2.13 | 1.56 | -1.29 | -- | -- | -1.12 | 1.86 | 25.53 | 244 | -- | -- |
| 210.84 | 0.676 | 11.4 | -0.78 | -- | -3.2 | -- | 9.06 | -0.7 | -- | 25.12 | 123 | -- | -- |
| 156.9 | 0.587 | 11.6 | -2.31 | 2 | -- | 0.823 | -- | -1.19 | 2.63 | -- | -- | -- | -- |
| 159.27 | 0.591 | 11.6 | -2.33 | 2 | -- | -- | -- | -1.19 | 2.6 | -- | -- | -- | -- |
| 229.16 | 0.708 | 11.5 | -1.89 | -- | -2.55 | -- | -- | -0.913 | -- | 24.6 | 150 | -- | -- |
| 244.26 | 0.728 | 11.5 | -- | 1.4 | -1.78 | -- | -- | -0.699 | 1.27 | 23.06 | 297 | -- | -- |
| 393.16 | 0.927 | 11.6 | -2.25 | -- | -- | -- | -- | -1.14 | -- | -- | -- | -- | -- |
| 302.62 | 0.814 | 11.5 | -- | 1.95 | -- | -- | -- | -0.931 | 2.59 | -- | -- | -- | -- |
| 318.63 | 0.831 | 11.5 | -- | -- | -2.76 | -- | -- | -0.625 | -- | 23.9 | 96 | -- | -- |
| 526.35 | 1.07 | 11.5 | -- | -- | -- | -- | -- | -0.891 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 2 | 107.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 6 |
| 10 | 110.00 | temperature | 20 | 270 | > th | dose dependent | sin | 1 | NA |
| 15 | 111.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 17 | 111.18 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 36 | 113.12 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 5 |
| 43 | 113.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 46 | 113.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 14 |
| 90 | 115.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 5 |
| 112 | 116.23 | temperature | 10 | 270 | > th | dose dependent | sin | 0 | NA |
| 172 | 117.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 179 | 117.59 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 221 | 118.11 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 9 |
| 237 | 118.40 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 290 | 119.02 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 356 | 119.82 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 12 |
| 359 | 119.83 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 5 |
| 369 | 119.97 | temperature | 25 | 90 | > th | dose dependent | rect. | 10 | 23 |
| 392 | 120.24 | temperature | 25 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 404 | 120.39 | temperature | 25 | 10 | > th | dose dependent | sin | 20 | NA |
| 468 | 120.90 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 5 |
| 561 | 121.45 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 583 | 121.53 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 749 | 122.66 | temperature | 30 | 720 | < th | dose dependent | sin | 3 | NA |
| 768 | 122.80 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 1 |