Os01g0591300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytosolic aldehyde dehydrogenase RF2D.
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Os01g0591300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytosolic aldehyde dehydrogenase RF2D.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.89 | 0.579 | 11.2 | 1.38 | 1.2 | -2.22 | -0.382 | -0.194 | 0.354 | 15.3 | 14.9 | 1297 | -- | -- |
| 151.91 | 0.574 | 11.2 | 1.42 | 1.19 | -2.23 | -0.367 | -- | 0.364 | 15.3 | 14.8 | 1278 | -- | -- |
| 152.3 | 0.575 | 11.2 | 1.4 | 1.19 | -2.23 | -- | -0.0355 | 0.359 | 15.4 | 14.8 | 1272 | -- | -- |
| 152.29 | 0.575 | 11.2 | 1.41 | 1.18 | -2.24 | -- | -- | 0.362 | 15.4 | 14.8 | 1256 | -- | -- |
| 224.51 | 0.698 | 11.2 | 1.48 | -- | -2.67 | -- | 0.0242 | 0.406 | -- | 14.9 | 1153 | -- | -- |
| 234.94 | 0.719 | 11.3 | 0.737 | 1.39 | -- | -0.292 | -- | -0.0372 | 15.1 | -- | -- | -- | -- |
| 235.22 | 0.718 | 11.3 | 0.731 | 1.39 | -- | -- | -- | -0.0389 | 15.1 | -- | -- | -- | -- |
| 224.5 | 0.698 | 11.2 | 1.48 | -- | -2.67 | -- | -- | 0.398 | -- | 14.8 | 1154 | -- | -- |
| 197.92 | 0.655 | 11.2 | -- | 1.2 | -1.55 | -- | -- | 0.116 | 15.5 | 16.5 | 1195 | -- | -- |
| 346.05 | 0.869 | 11.3 | 0.672 | -- | -- | -- | -- | -0.0753 | -- | -- | -- | -- | -- |
| 249.31 | 0.739 | 11.3 | -- | 1.38 | -- | -- | -- | -0.12 | 15.1 | -- | -- | -- | -- |
| 274.58 | 0.772 | 11.2 | -- | -- | -1.92 | -- | -- | 0.149 | -- | 16.3 | 1145 | -- | -- |
| 357.96 | 0.883 | 11.3 | -- | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 18 |
| 2 | 142.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 7 | 142.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 36 | 145.58 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 55 | 146.39 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 184 | 151.60 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 8 |
| 190 | 151.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 197 | 151.74 | temperature | 15 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 210 | 151.88 | temperature | 15 | 1440 | > th | dose dependent | sin | 15 | NA |
| 219 | 151.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 248 | 152.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 342 | 152.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 355 | 152.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 370 | 152.50 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 371 | 152.51 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 376 | 152.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 385 | 152.54 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 484 | 152.70 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 677 | 153.40 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 835 | 154.00 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 952 | 154.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 999 | 154.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 22 |