Os01g0590200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0590200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.91 | 0.274 | 9.6 | 0.317 | 0.786 | 0.633 | 0.614 | 0.138 | -0.0267 | 14.9 | 20.4 | 1202 | -- | -- |
| 33.95 | 0.271 | 9.6 | 0.295 | 0.783 | 0.615 | 0.611 | -- | -0.033 | 14.9 | 20.4 | 1218 | -- | -- |
| 35.12 | 0.276 | 9.6 | 0.299 | 0.788 | 0.617 | -- | -0.0152 | -0.0335 | 14.9 | 20.5 | 1194 | -- | -- |
| 35.12 | 0.276 | 9.6 | 0.303 | 0.789 | 0.62 | -- | -- | -0.0326 | 14.9 | 20.5 | 1194 | -- | -- |
| 67.26 | 0.384 | 9.59 | 0.41 | -- | 0.436 | -- | -0.0371 | 0.0056 | -- | 20.5 | 1194 | -- | -- |
| 42.84 | 0.307 | 9.57 | 0.543 | 0.741 | -- | 0.708 | -- | 0.105 | 15.1 | -- | -- | -- | -- |
| 44.49 | 0.312 | 9.57 | 0.558 | 0.743 | -- | -- | -- | 0.109 | 15 | -- | -- | -- | -- |
| 67.27 | 0.384 | 9.59 | 0.417 | -- | 0.438 | -- | -- | 0.0071 | -- | 20.5 | 1194 | -- | -- |
| 37.13 | 0.284 | 9.61 | -- | 0.785 | 0.737 | -- | -- | -0.0799 | 14.9 | 20.41 | 1232 | -- | -- |
| 76.14 | 0.408 | 9.57 | 0.526 | -- | -- | -- | -- | 0.0897 | -- | -- | -- | -- | -- |
| 52.69 | 0.34 | 9.58 | -- | 0.732 | -- | -- | -- | 0.0469 | 15 | -- | -- | -- | -- |
| 70.11 | 0.39 | 9.61 | -- | -- | 0.721 | -- | -- | -0.0966 | -- | 20.41 | 1631 | -- | -- |
| 83.43 | 0.426 | 9.58 | -- | -- | -- | -- | -- | 0.0314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.17 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 15 |
| 2 | 32.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 8 | 32.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 27 | 32.75 | temperature | 15 | 30 | > th | dose dependent | sin | 0 | NA |
| 80 | 33.27 | temperature | 30 | 90 | < th | dose dependent | sin | 0 | NA |
| 85 | 33.28 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 127 | 33.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 131 | 33.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 132 | 33.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 196 | 33.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 240 | 33.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 242 | 33.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 260 | 33.98 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 273 | 34.00 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 289 | 34.02 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 375 | 34.18 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 401 | 34.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 433 | 34.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 488 | 34.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 501 | 34.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 546 | 34.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 23 |
| 579 | 34.45 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 10 |
| 606 | 34.49 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 726 | 34.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 19 |
| 733 | 34.61 | temperature | 25 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 734 | 34.61 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 736 | 34.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 747 | 34.62 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 804 | 34.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 847 | 34.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 881 | 34.74 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 923 | 34.78 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 936 | 34.79 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 19 |
| 955 | 34.81 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 991 | 34.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 8 |