Os01g0589100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0589100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.02 | 0.29 | 9.55 | -0.735 | 0.2 | -0.675 | -0.898 | -0.453 | -0.745 | 4.41 | 72.58 | 18605 | -- | -- |
| 38.29 | 0.288 | 9.54 | -0.774 | 0.222 | -0.695 | -0.888 | -- | -0.771 | 4.33 | 74 | 18609 | -- | -- |
| 40.21 | 0.295 | 9.54 | -0.73 | 0.203 | -0.671 | -- | -0.452 | -0.74 | 4.16 | 72.61 | 18709 | -- | -- |
| 40.33 | 0.296 | 9.54 | -0.811 | 0.205 | -0.714 | -- | -- | -0.782 | 4.41 | 73.57 | 18607 | -- | -- |
| 42.22 | 0.303 | 9.54 | -0.717 | -- | -0.68 | -- | -0.466 | -0.736 | -- | 72.79 | 18579 | -- | -- |
| 49.43 | 0.33 | 9.49 | -0.908 | 0.222 | -- | -0.845 | -- | -0.548 | 4.32 | -- | -- | -- | -- |
| 51.39 | 0.336 | 9.49 | -0.9 | 0.216 | -- | -- | -- | -0.543 | 4.12 | -- | -- | -- | -- |
| 42.39 | 0.303 | 9.55 | -0.8 | -- | -0.751 | -- | -- | -0.778 | -- | 73.91 | 18536 | -- | -- |
| 50.79 | 0.332 | 9.49 | -- | 0.191 | -0.807 | -- | -- | -0.492 | 3.54 | 64.03 | 28557 | -- | -- |
| 53.92 | 0.343 | 9.49 | -0.891 | -- | -- | -- | -- | -0.537 | -- | -- | -- | -- | -- |
| 72.74 | 0.399 | 9.47 | -- | 0.198 | -- | -- | -- | -0.443 | 4.2 | -- | -- | -- | -- |
| 51.22 | 0.333 | 9.47 | -- | -- | -0.969 | -- | -- | -0.432 | -- | 64.01 | 28422 | -- | -- |
| 74.88 | 0.404 | 9.47 | -- | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.58 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 2 | 39.60 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 3 | 39.62 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 8 | 39.91 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 10 | 39.94 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 12 | 40.13 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 13 | 40.18 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 14 | 40.18 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 15 | 40.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 21 |
| 22 | 40.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 37 | 40.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 12 |
| 42 | 40.32 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 22 |
| 62 | 40.38 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 19 | 21 |
| 69 | 40.40 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 20 |
| 73 | 40.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 77 | 40.41 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 90 | 40.44 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 21 |
| 120 | 40.47 | humidity | 80.0 | 14400 | > th | dose independent | no | NA | NA |
| 125 | 40.47 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 22 |
| 127 | 40.47 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 146 | 40.50 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 19 | 22 |
| 147 | 40.50 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 22 |
| 151 | 40.51 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 164 | 40.53 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 172 | 40.53 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 173 | 40.53 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 24 | 17 |
| 183 | 40.54 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 8 | 21 |
| 188 | 40.54 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 191 | 40.55 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 196 | 40.56 | humidity | 80.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 209 | 40.56 | humidity | 90.0 | 14400 | < th | dose dependent | no | NA | NA |
| 218 | 40.56 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 22 |
| 234 | 40.57 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 237 | 40.57 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 10 | 19 |
| 245 | 40.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 21 |
| 267 | 40.58 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 23 | 23 |
| 280 | 40.59 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 282 | 40.59 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 306 | 40.60 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 12 | 14 |
| 309 | 40.60 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 10 | 16 |
| 311 | 40.60 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 12 | 17 |
| 325 | 40.61 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 337 | 40.61 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 355 | 40.62 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 368 | 40.62 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 6 | 20 |
| 393 | 40.64 | humidity | 80.0 | 14400 | < th | dose independent | no | NA | NA |
| 401 | 40.64 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 418 | 40.64 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 422 | 40.64 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 428 | 40.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 448 | 40.66 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 492 | 40.67 | humidity | 50.0 | 14400 | > th | dose dependent | no | NA | NA |
| 517 | 40.68 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 518 | 40.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 519 | 40.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 536 | 40.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 582 | 40.70 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 588 | 40.70 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 590 | 40.70 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 613 | 40.71 | humidity | 80.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 631 | 40.71 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 656 | 40.72 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 663 | 40.72 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 742 | 40.74 | humidity | 70.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 745 | 40.74 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 6 |