Os01g0588900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein 730 family protein.
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Os01g0588900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein 730 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.06 | 0.472 | 13.2 | -0.503 | 0.872 | -0.651 | 2.9 | 1.18 | -0.273 | 9.06 | 0.42 | 83 | -- | -- |
| 104.08 | 0.475 | 13.2 | -0.421 | 0.799 | -0.828 | 2.72 | -- | -0.245 | 7.63 | 0.8694 | 90 | -- | -- |
| 111.59 | 0.496 | 13.2 | -0.359 | 1.06 | -0.376 | -- | -0.744 | -0.236 | 10.2 | 1.78 | 47 | -- | -- |
| 115.13 | 0.5 | 13.2 | -0.385 | 1.07 | -0.415 | -- | -- | -0.258 | 9.89 | 0.54 | 63 | -- | -- |
| 132.78 | 0.54 | 13.2 | -0.395 | -- | -1.03 | -- | -0.542 | -0.239 | -- | 0.96 | 52 | -- | -- |
| 113.5 | 0.499 | 13.2 | -0.401 | 1.49 | -- | 1.23 | -- | -0.224 | 10.4 | -- | -- | -- | -- |
| 119.53 | 0.512 | 13.1 | -0.349 | 1.48 | -- | -- | -- | -0.219 | 10.6 | -- | -- | -- | -- |
| 134.7 | 0.543 | 13.2 | -0.402 | -- | -1.03 | -- | -- | -0.242 | -- | 0.953 | 46 | -- | -- |
| 118.83 | 0.508 | 13.2 | -- | 1.08 | -0.421 | -- | -- | -0.23 | 9.86 | 0.65 | 67 | -- | -- |
| 253.93 | 0.745 | 13.2 | -0.376 | -- | -- | -- | -- | -0.226 | -- | -- | -- | -- | -- |
| 122.74 | 0.518 | 13.1 | -- | 1.48 | -- | -- | -- | -0.18 | 10.6 | -- | -- | -- | -- |
| 138.5 | 0.548 | 13.2 | -- | -- | -1.04 | -- | -- | -0.23 | -- | 1.819 | 16 | -- | -- |
| 257.67 | 0.749 | 13.2 | -- | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.15 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 3 | 93.70 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 4 | 94.60 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 6 | 95.35 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 15 | 96.61 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 16 | 96.74 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 25 | 97.10 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 26 | 97.39 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 5 |
| 27 | 97.39 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 18 | 11 |
| 30 | 97.49 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 37 | 97.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 39 | 97.87 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 6 |
| 40 | 97.88 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 51 | 98.18 | humidity | 80.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 60 | 98.35 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 70 | 98.44 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 80 | 98.62 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 6 |
| 85 | 98.68 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 13 |
| 105 | 98.88 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 13 | 16 |
| 111 | 99.01 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 5 |
| 116 | 99.04 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 124 | 99.10 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 126 | 99.11 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 14 |
| 127 | 99.11 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 14 |
| 132 | 99.13 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 11 |
| 134 | 99.14 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 4 |
| 137 | 99.18 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 7 |
| 142 | 99.21 | precipitation | 0.1 | 30 | < th | dose independent | sin | 3 | NA |
| 144 | 99.21 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 3 | NA |
| 146 | 99.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 23 |
| 148 | 99.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 150 | 99.25 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 153 | 99.28 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 13 |
| 155 | 99.29 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 156 | 99.29 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 22 |
| 157 | 99.29 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 22 |
| 162 | 99.37 | radiation | 1.0 | 30 | > th | dose independent | sin | 2 | NA |
| 165 | 99.39 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 172 | 99.48 | wind | 1.0 | 270 | > th | dose independent | sin | 17 | NA |
| 173 | 99.49 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 177 | 99.51 | wind | 5.0 | 720 | < th | dose independent | rect. | 7 | 6 |
| 178 | 99.51 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 184 | 99.52 | temperature | 20.0 | 720 | > th | dose independent | sin | 20 | NA |
| 185 | 99.52 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 215 | 99.69 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 219 | 99.70 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 15 |
| 229 | 99.74 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 11 |
| 239 | 99.76 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 250 | 99.77 | radiation | 1.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 253 | 99.79 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 254 | 99.79 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 264 | 99.82 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 270 | 99.84 | radiation | 1.0 | 90 | < th | dose independent | sin | 7 | NA |
| 276 | 99.88 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 5 |
| 279 | 99.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 287 | 99.91 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 298 | 99.96 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 301 | 99.97 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 302 | 99.97 | wind | 1.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 317 | 100.00 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 330 | 100.03 | humidity | 80.0 | 270 | > th | dose independent | rect. | 22 | 6 |
| 340 | 100.05 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 354 | 100.09 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 356 | 100.09 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 6 |
| 357 | 100.09 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 14 |
| 361 | 100.09 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 381 | 100.14 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 384 | 100.14 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 388 | 100.16 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 391 | 100.16 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 394 | 100.16 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 5 |
| 421 | 100.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 12 |
| 422 | 100.20 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 441 | 100.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 445 | 100.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 446 | 100.23 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 460 | 100.26 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 461 | 100.26 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 488 | 100.29 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 6 |
| 498 | 100.31 | humidity | 90.0 | 30 | > th | dose independent | sin | 9 | NA |
| 516 | 100.32 | wind | 9.0 | 720 | < th | dose dependent | rect. | 7 | 6 |
| 551 | 100.38 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 584 | 100.39 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 632 | 100.40 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 642 | 100.40 | radiation | 1.0 | 720 | > th | dose independent | rect. | 6 | 10 |
| 695 | 100.46 | wind | 1.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 697 | 100.47 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 699 | 100.47 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 705 | 100.47 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 710 | 100.48 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 729 | 100.50 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 742 | 100.52 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 20 |
| 747 | 100.52 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 20 |
| 766 | 100.56 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 772 | 100.57 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 779 | 100.58 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 783 | 100.58 | wind | 9.0 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 822 | 100.63 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 826 | 100.64 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 838 | 100.64 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 840 | 100.65 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 10 |
| 843 | 100.65 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 10 |
| 852 | 100.67 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 2 |
| 907 | 100.78 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 915 | 100.78 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 924 | 100.79 | wind | 9.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 925 | 100.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 927 | 100.79 | temperature | 30.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 928 | 100.79 | humidity | 50.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 931 | 100.79 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 932 | 100.79 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 1 | 4 |
| 940 | 100.79 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 20 |
| 945 | 100.79 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 4 |
| 975 | 100.83 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 24 | 8 |
| 987 | 100.84 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 18 | 11 |
| 994 | 100.85 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 20 | 9 |