Os01g0587300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0587300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.71 | 0.392 | 9.41 | 0.835 | 0.334 | -0.934 | 0.0106 | -0.11 | 0.191 | 14.6 | 21.92 | 1034 | -- | -- |
| 69.71 | 0.389 | 9.4 | 0.845 | 0.336 | -0.912 | 0.0057 | -- | 0.196 | 14.6 | 22 | 1021 | -- | -- |
| 69.71 | 0.389 | 9.41 | 0.835 | 0.334 | -0.935 | -- | -0.112 | 0.191 | 14.6 | 21.92 | 1036 | -- | -- |
| 69.71 | 0.389 | 9.4 | 0.853 | 0.335 | -0.914 | -- | -- | 0.199 | 14.6 | 22 | 1020 | -- | -- |
| 76.1 | 0.406 | 9.4 | 0.844 | -- | -0.996 | -- | -0.106 | 0.205 | -- | 21.95 | 1035 | -- | -- |
| 102.36 | 0.474 | 9.47 | 0.53 | 0.449 | -- | -0.0102 | -- | -0.0972 | 13.7 | -- | -- | -- | -- |
| 102.36 | 0.474 | 9.47 | 0.53 | 0.449 | -- | -- | -- | -0.0973 | 13.7 | -- | -- | -- | -- |
| 76.14 | 0.406 | 9.4 | 0.876 | -- | -0.992 | -- | -- | 0.21 | -- | 22 | 1035 | -- | -- |
| 86.75 | 0.434 | 9.43 | -- | 0.34 | -0.697 | -- | -- | 0.0645 | 14.4 | 22.4 | 979 | -- | -- |
| 114.6 | 0.5 | 9.47 | 0.511 | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
| 109.75 | 0.49 | 9.48 | -- | 0.439 | -- | -- | -- | -0.156 | 13.7 | -- | -- | -- | -- |
| 93.25 | 0.45 | 9.43 | -- | -- | -0.763 | -- | -- | 0.072 | -- | 22.33 | 979 | -- | -- |
| 121.49 | 0.514 | 9.49 | -- | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 3 | 64.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 4 | 64.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 17 | 64.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 19 | 65.07 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 37 | 65.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 62 | 66.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 78 | 66.85 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 133 | 67.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 261 | 69.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 304 | 69.87 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 317 | 69.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 586 | 70.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 689 | 71.06 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 850 | 71.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 868 | 71.30 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |