Os01g0585600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF630 domain containing protein.
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Os01g0585600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF630 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.7 | 0.209 | 12 | -0.024 | 0.587 | -0.725 | 0.717 | -0.0665 | -0.101 | 4.61 | 31.2 | 10 | -- | -- |
| 19.63 | 0.208 | 12 | -0.0331 | 0.584 | -0.724 | 0.694 | -- | -0.103 | 4.59 | 31.2 | 10 | -- | -- |
| 20.76 | 0.214 | 12.1 | -0.0866 | 0.579 | -0.702 | -- | 0.343 | -0.117 | 4.6 | 31.2 | 10 | -- | -- |
| 20.31 | 0.211 | 12.1 | -0.034 | 0.54 | -0.68 | -- | -- | -0.129 | 4.66 | 26.8 | 10 | -- | -- |
| 34.67 | 0.276 | 12 | 0.00234 | -- | -0.253 | -- | 0.524 | -0.0343 | -- | 31.2 | 10 | -- | -- |
| 26.36 | 0.241 | 12 | 0.122 | 0.414 | -- | 0.567 | -- | 0.0227 | 5.77 | -- | -- | -- | -- |
| 27.14 | 0.244 | 12 | 0.126 | 0.417 | -- | -- | -- | 0.0205 | 5.85 | -- | -- | -- | -- |
| 32.09 | 0.265 | 12 | 0.0278 | -- | -0.504 | -- | -- | -0.0507 | -- | 24.1 | 8 | -- | -- |
| 20.33 | 0.211 | 12.1 | -- | 0.535 | -0.667 | -- | -- | -0.123 | 4.69 | 26.7 | 9 | -- | -- |
| 36.18 | 0.281 | 12 | 0.139 | -- | -- | -- | -- | 0.0302 | -- | -- | -- | -- | -- |
| 27.56 | 0.246 | 12 | -- | 0.419 | -- | -- | -- | 0.00646 | 5.83 | -- | -- | -- | -- |
| 32.09 | 0.264 | 12 | -- | -- | -0.514 | -- | -- | -0.0551 | -- | 24.1 | 2 | -- | -- |
| 36.69 | 0.283 | 12 | -- | -- | -- | -- | -- | 0.0148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.41 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 2 | 18.82 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 3 | 18.86 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 5 | 18.98 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 7 | 19.01 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 8 | 19.01 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 9 | 19.02 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 16 | 19.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 17 | 19.11 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 35 | 19.20 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 42 | 19.24 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 49 | 19.26 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 57 | 19.28 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 16 |
| 60 | 19.29 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 62 | 19.29 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 65 | 19.30 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 68 | 19.30 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 84 | 19.32 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 97 | 19.34 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 184 | 19.45 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 18 |
| 196 | 19.47 | temperature | 15.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 267 | 19.53 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 278 | 19.54 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 279 | 19.55 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 302 | 19.56 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 13 | 15 |
| 303 | 19.57 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 360 | 19.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 373 | 19.62 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 24 | 10 |
| 432 | 19.66 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 474 | 19.68 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 493 | 19.69 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 494 | 19.69 | temperature | 20.0 | 10 | > th | dose dependent | sin | 11 | NA |
| 532 | 19.70 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 533 | 19.70 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 576 | 19.72 | temperature | 25.0 | 4320 | > th | dose independent | sin | 14 | NA |
| 579 | 19.72 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 581 | 19.72 | temperature | 30.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 596 | 19.72 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 16 |
| 598 | 19.72 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 618 | 19.73 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 625 | 19.74 | temperature | 25.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 677 | 19.76 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 705 | 19.77 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 731 | 19.78 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 750 | 19.78 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 762 | 19.79 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 883 | 19.83 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 900 | 19.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 905 | 19.84 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 921 | 19.84 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 19 |
| 954 | 19.86 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 18 |