Os01g0585200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0585200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 771.23 | 1.3 | 5.4 | 2.34 | 0.919 | 1.77 | 0.353 | -7.12 | 2.26 | 7.37 | 0.4028 | 1550 | 15.2 | -- |
| 812.05 | 1.33 | 5.29 | 2.3 | 0.997 | 2.21 | 0.0277 | -- | 2.22 | 7.47 | 1.289 | 2106 | 15.9 | -- |
| 768.05 | 1.29 | 5.4 | 2.2 | 0.925 | 1.8 | -- | -7.34 | 2.26 | 7.44 | 0.212 | 1605 | 15.8 | -- |
| 811.1 | 1.33 | 5.28 | 2.37 | 0.98 | 2.27 | -- | -- | 2.27 | 7.26 | 1.248 | 2106 | 16.6 | -- |
| 810.35 | 1.33 | 5.44 | 2.11 | -- | 1.74 | -- | -6.6 | 2.34 | -- | 0.3182 | 1624 | 16.8 | -- |
| 845.23 | 1.36 | 5.32 | 2.7 | 0.964 | -- | -0.301 | -- | 2.05 | 7.78 | -- | -- | -- | -- |
| 845.47 | 1.36 | 5.32 | 2.69 | 0.965 | -- | -- | -- | 2.05 | 7.71 | -- | -- | -- | -- |
| 851.52 | 1.36 | 5.27 | 2.39 | -- | 2.34 | -- | -- | 2.36 | -- | 1.264 | 1747 | 17.5 | -- |
| 947.88 | 1.43 | 5.27 | -- | 0.952 | 2.87 | -- | -- | 2.29 | 7.63 | 3 | 2844 | 17.6 | -- |
| 895.71 | 1.4 | 5.34 | 2.7 | -- | -- | -- | -- | 2.06 | -- | -- | -- | -- | -- |
| 1035.99 | 1.51 | 5.39 | -- | 0.987 | -- | -- | -- | 1.75 | 7.52 | -- | -- | -- | -- |
| 975.81 | 1.45 | 5.27 | -- | -- | 3.22 | -- | -- | 2.36 | -- | 2.213 | 1655 | 18.7 | -- |
| 1088.16 | 1.54 | 5.41 | -- | -- | -- | -- | -- | 1.76 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 753.81 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 4 | 762.21 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 5 | 762.94 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 13 | 766.28 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 29 | 768.49 | radiation | 1 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 36 | 768.77 | radiation | 1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 41 | 769.00 | wind | 3 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 46 | 769.32 | wind | 3 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 47 | 769.32 | wind | 3 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 64 | 769.84 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 70 | 769.97 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 86 | 770.50 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 97 | 770.79 | atmosphere | 1000 | 14400 | > th | dose independent | sin | 21 | NA |
| 178 | 772.47 | atmosphere | 1000 | 14400 | < th | dose independent | sin | 21 | NA |
| 235 | 773.23 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 439 | 775.05 | atmosphere | 1000 | 14400 | > th | dose independent | no | NA | NA |
| 445 | 775.11 | humidity | 90 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 483 | 775.44 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 548 | 775.85 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 608 | 776.09 | atmosphere | 1000 | 14400 | < th | dose independent | no | NA | NA |
| 613 | 776.21 | wind | 5 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 622 | 776.46 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 626 | 776.49 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 645 | 776.64 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 649 | 776.68 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 671 | 776.79 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 766 | 777.94 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 771 | 778.03 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 785 | 778.13 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 800 | 778.31 | radiation | 10 | 43200 | < th | dose dependent | rect. | 17 | 18 |
| 814 | 778.41 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 837 | 778.59 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 838 | 778.59 | radiation | 10 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 846 | 778.71 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 856 | 778.77 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 857 | 778.77 | radiation | 10 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 870 | 778.78 | atmosphere | 1000 | 14400 | < th | dose dependent | sin | 19 | NA |
| 897 | 778.88 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 951 | 779.18 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 975 | 779.33 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 1 |