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Os01g0584800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0205) R2 : 0.805
β1 : 1.68 (0.075) R2dD : 0.224 R2D : 0.171
β2 : 1.12 (0.0597) R2dC : 0.205 R2C : 0.396
β3 : -1.07 (0.0566) R2dE : 0.21 R2E : 0.391
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.3 (0.044) R2dN8 : 0.027 R2N8 : -0.0225
σ : 0.383
deviance : 67.53
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_____
C
peak time of C : 15.5
E
wheather : wind
threshold : 5.29
memory length : 279
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.62
open length of G : 1.35

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.76 0.384 10.2 1.69 1.16 -1.05 0.726 0.429 0.302 15.5 5.384 273 3.77 1.15
66.74 0.38 10.2 1.68 1.14 -1.05 0.561 -- 0.3 15.5 5.35 277 3.64 1.32
68.01 0.384 10.2 1.7 1.17 -1.02 -- 0.379 0.296 15.5 5.243 276 3.66 1.32
67.53 0.383 10.2 1.68 1.12 -1.07 -- -- 0.3 15.5 5.29 279 3.62 1.35
111.56 0.492 10.2 1.63 -- -1.51 -- -0.149 0.269 -- 5.8 307 3.45 0.784
103.52 0.477 10.3 1.62 1.82 -- 0.68 -- 0.206 16.6 -- -- -- --
104.75 0.479 10.3 1.62 1.83 -- -- -- 0.209 16.6 -- -- -- --
108.53 0.485 10.2 1.64 -- -1.57 -- -- 0.224 -- 5.401 323 2.52 1.9
141.38 0.554 10.3 -- 1.13 -1.03 -- -- 0.104 15.6 5.723 278 3.45 1.78
282.76 0.786 10.3 1.55 -- -- -- -- 0.161 -- -- -- -- --
174.31 0.618 10.3 -- 1.8 -- -- -- 0.0284 16.6 -- -- -- --
182.32 0.629 10.3 -- -- -1.54 -- -- 0.116 -- 6.7 328 2.5 2.14
346.47 0.869 10.3 -- -- -- -- -- -0.0111 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.49 wind 5.0 270 < th dose independent rect. 4 1
2 68.71 wind 5.0 270 < th dose independent rect. 3 3
3 68.74 wind 5.0 90 < th dose independent rect. 3 5
6 69.60 precipitation 0.1 90 < th dose independent rect. 3 5
7 69.60 precipitation 0.1 90 < th dose dependent rect. 3 5
8 69.77 wind 9.0 90 < th dose independent rect. 8 19
9 69.85 precipitation 0.1 270 < th dose independent rect. 3 3
10 69.85 precipitation 0.1 270 < th dose dependent rect. 3 3
11 69.86 precipitation 0.1 270 < th dose independent rect. 4 1
12 69.86 precipitation 0.1 270 < th dose dependent rect. 4 1
16 70.08 wind 9.0 270 < th dose independent rect. 6 21
17 70.14 radiation 1.0 270 < th dose dependent rect. 4 1
19 70.24 temperature 10.0 270 > th dose independent rect. 4 1
21 70.24 temperature 30.0 270 < th dose independent rect. 4 1
22 70.24 humidity 50.0 270 > th dose independent rect. 4 1
25 70.24 atmosphere 995.0 270 > th dose independent rect. 4 1
26 70.24 atmosphere 1010.0 270 < th dose independent rect. 4 1
28 70.24 radiation 20.0 270 < th dose independent rect. 4 1
31 70.24 temperature 10.0 270 > th dose independent rect. 5 23
33 70.25 temperature 10.0 90 > th dose independent rect. 3 5
35 70.25 temperature 30.0 90 < th dose independent rect. 3 5
36 70.25 humidity 50.0 90 > th dose independent rect. 3 5
38 70.25 atmosphere 995.0 90 > th dose independent rect. 3 5
39 70.25 atmosphere 1015.0 90 < th dose independent rect. 3 5
40 70.25 temperature 10.0 90 > th dose independent rect. 8 19
43 70.28 radiation 40.0 270 < th dose dependent rect. 4 1
48 70.47 radiation 1.0 270 < th dose independent rect. 4 1
50 70.49 radiation 40.0 90 < th dose independent rect. 3 5
52 70.60 temperature 10.0 270 > th dose independent rect. 3 3
54 70.60 temperature 30.0 270 < th dose independent rect. 3 3
55 70.60 humidity 50.0 270 > th dose independent rect. 3 3
58 70.60 atmosphere 995.0 270 > th dose independent rect. 3 3
59 70.60 atmosphere 1015.0 270 < th dose independent rect. 3 3
60 70.60 radiation 20.0 270 < th dose independent rect. 3 3
63 70.60 temperature 10.0 270 > th dose independent rect. 6 21
64 70.65 radiation 40.0 270 < th dose dependent rect. 3 3
65 70.67 precipitation 0.1 90 < th dose independent rect. 8 19
66 70.67 precipitation 0.1 90 < th dose dependent rect. 8 19
72 70.82 wind 9.0 270 < th dose dependent rect. 4 1
112 71.35 wind 9.0 270 < th dose dependent rect. 3 3
113 71.39 wind 9.0 90 < th dose dependent rect. 3 5
114 71.45 wind 9.0 10 < th dose independent rect. 9 19
118 71.61 wind 1.0 270 > th dose independent rect. 3 2
120 71.63 precipitation 0.1 10 < th dose independent rect. 4 5
121 71.63 precipitation 0.1 10 < th dose dependent rect. 4 5
125 71.68 precipitation 0.1 270 < th dose independent rect. 6 21
126 71.68 precipitation 0.1 270 < th dose dependent rect. 6 21
130 71.73 temperature 10.0 90 > th dose dependent rect. 3 5
166 71.99 atmosphere 995.0 90 > th dose independent rect. 8 19
168 72.08 humidity 50.0 270 > th dose dependent rect. 4 1
173 72.27 atmosphere 995.0 90 > th dose dependent rect. 3 5
176 72.31 atmosphere 995.0 270 > th dose dependent rect. 4 1
183 72.42 radiation 20.0 270 < th dose dependent rect. 2 6
221 72.82 wind 9.0 10 < th dose dependent rect. 4 5
246 73.09 radiation 1.0 270 < th dose dependent rect. 3 7
276 73.45 temperature 10.0 270 > th dose dependent rect. 4 1
281 73.50 atmosphere 995.0 270 > th dose independent rect. 6 21
337 74.25 wind 1.0 270 > th dose independent rect. 2 5
350 74.33 temperature 10.0 90 > th dose dependent rect. 8 7
378 74.48 temperature 30.0 270 < th dose dependent rect. 4 1
396 74.75 wind 9.0 1440 < th dose independent rect. 5 4
397 74.75 temperature 10.0 1440 > th dose independent rect. 5 4
400 74.75 humidity 50.0 1440 > th dose independent rect. 5 4
402 74.75 atmosphere 995.0 1440 > th dose independent rect. 5 4
403 74.75 atmosphere 1015.0 1440 < th dose independent rect. 5 4
405 74.75 temperature 10.0 1440 > th dose independent rect. 9 20
416 74.97 wind 1.0 90 > th dose independent rect. 8 19
420 75.01 temperature 15.0 90 > th dose independent rect. 15 17
511 75.66 humidity 50.0 30 > th dose independent rect. 8 20
545 75.82 temperature 15.0 90 > th dose independent rect. 8 7
571 76.02 atmosphere 1015.0 90 < th dose independent rect. 8 19
573 76.04 precipitation 0.1 90 < th dose independent rect. 8 7
574 76.04 precipitation 0.1 90 < th dose dependent rect. 8 7
598 76.19 humidity 50.0 270 > th dose dependent rect. 2 5
599 76.20 temperature 10.0 10 > th dose dependent rect. 8 7
606 76.25 wind 9.0 90 < th dose independent rect. 8 7
626 76.34 atmosphere 1015.0 90 < th dose independent rect. 8 7
656 76.49 temperature 10.0 270 > th dose dependent rect. 8 2
657 76.50 radiation 40.0 90 < th dose independent rect. 13 19
677 76.61 atmosphere 995.0 90 > th dose independent rect. 8 7
692 76.64 radiation 40.0 90 < th dose independent rect. 15 17
716 76.79 radiation 40.0 270 < th dose independent rect. 11 20
720 76.80 humidity 90.0 90 < th dose independent rect. 8 7
721 76.80 precipitation 0.1 90 < th dose independent rect. 15 17
722 76.80 precipitation 0.1 90 < th dose dependent rect. 15 17
739 76.89 wind 9.0 90 < th dose independent rect. 15 17
748 76.93 radiation 1.0 90 > th dose independent rect. 8 7
751 76.94 wind 1.0 90 > th dose independent rect. 8 7
772 77.05 temperature 10.0 90 > th dose dependent rect. 8 19
774 77.08 atmosphere 1015.0 270 < th dose dependent rect. 4 1
811 77.37 atmosphere 995.0 90 > th dose independent rect. 15 17
825 77.47 atmosphere 1015.0 90 < th dose independent rect. 15 17
834 77.54 temperature 15.0 90 > th dose independent rect. 17 15
853 77.62 atmosphere 1005.0 90 > th dose independent rect. 4 4
867 77.68 humidity 50.0 270 > th dose independent rect. 6 21
883 77.80 wind 9.0 270 < th dose dependent rect. 7 19
899 77.87 humidity 50.0 270 > th dose dependent rect. 19 7
903 77.92 temperature 15.0 270 > th dose independent rect. 11 10
908 77.94 radiation 40.0 270 < th dose dependent rect. 2 15
913 77.98 radiation 40.0 90 < th dose dependent rect. 13 19
915 78.00 radiation 40.0 90 < th dose independent rect. 4 18
922 78.06 atmosphere 1015.0 270 < th dose independent rect. 11 10
926 78.07 precipitation 0.1 270 < th dose independent rect. 3 16
929 78.07 precipitation 0.1 270 < th dose dependent rect. 3 16
933 78.10 wind 9.0 270 < th dose independent rect. 21 14
939 78.11 radiation 40.0 90 < th dose dependent rect. 15 17
949 78.15 atmosphere 1015.0 30 < th dose dependent rect. 4 5
953 78.17 wind 9.0 270 < th dose independent rect. 19 8
972 78.23 temperature 10.0 270 > th dose independent rect. 19 8
973 78.23 temperature 30.0 270 < th dose independent rect. 19 8
974 78.23 humidity 50.0 270 > th dose independent rect. 19 8
975 78.23 atmosphere 995.0 270 > th dose independent rect. 19 8
976 78.23 radiation 1.0 270 < th dose independent rect. 19 8
981 78.23 temperature 10.0 270 > th dose independent rect. 3 16
982 78.23 atmosphere 1015.0 270 < th dose independent rect. 3 16
985 78.23 radiation 1.0 270 < th dose dependent rect. 19 8
998 78.29 temperature 10.0 270 > th dose independent rect. 21 14
999 78.29 atmosphere 995.0 270 > th dose independent rect. 21 14
1000 78.29 humidity 50.0 90 > th dose independent rect. 15 17