Os01g0581900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0581900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.06 | 0.27 | 8.21 | 1.42 | 0.436 | -0.341 | -0.509 | 3.37 | 0.195 | 20 | 22.37 | 619 | -- | -- |
| 37.7 | 0.286 | 8.28 | 0.787 | 0.358 | -0.122 | 0.181 | -- | 0.0289 | 20.1 | 21.3 | 8384 | -- | -- |
| 33.63 | 0.27 | 8.22 | 1.32 | 0.433 | -0.314 | -- | 2.91 | 0.165 | 19.8 | 22.39 | 569 | -- | -- |
| 37.21 | 0.284 | 8.27 | 0.933 | 0.329 | -0.26 | -- | -- | 0.0607 | 20.1 | 14.6 | 16097 | -- | -- |
| 40.55 | 0.297 | 8.23 | 1.21 | -- | 0.0463 | -- | 2.44 | 0.0916 | -- | 18.85 | 563 | -- | -- |
| 38.17 | 0.29 | 8.29 | 0.738 | 0.36 | -- | 0.146 | -- | -0.0129 | 19.8 | -- | -- | -- | -- |
| 38.22 | 0.29 | 8.29 | 0.734 | 0.359 | -- | -- | -- | -0.0129 | 19.9 | -- | -- | -- | -- |
| 43.3 | 0.306 | 8.29 | 0.677 | -- | 0.257 | -- | -- | -0.0405 | -- | 24.57 | 527 | -- | -- |
| 43.29 | 0.306 | 8.34 | -- | 0.357 | 0.445 | -- | -- | -0.257 | 19.9 | 20.4 | 47520 | -- | -- |
| 45.26 | 0.314 | 8.28 | 0.73 | -- | -- | -- | -- | -0.0177 | -- | -- | -- | -- | -- |
| 52.42 | 0.339 | 8.31 | -- | 0.355 | -- | -- | -- | -0.0947 | 20.1 | -- | -- | -- | -- |
| 50.14 | 0.33 | 8.34 | -- | -- | 0.447 | -- | -- | -0.264 | -- | 20.5 | 47520 | -- | -- |
| 59.31 | 0.359 | 8.3 | -- | -- | -- | -- | -- | -0.0987 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 2 | 32.37 | wind | 7.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 3 | 32.42 | wind | 7.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 6 | 32.50 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 7 | 32.61 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 9 | 32.66 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 12 | 32.67 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 13 | 32.68 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 17 | 32.70 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 21 | 32.71 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 22 | 32.72 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 25 | 32.73 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 32 | 32.78 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 41 | 32.81 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 44 | 32.82 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 51 | 32.84 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 52 | 32.84 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 54 | 32.85 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 56 | 32.85 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 59 | 32.86 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 67 | 32.90 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 68 | 32.90 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 69 | 32.90 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 78 | 32.92 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 81 | 32.94 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 86 | 32.94 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 87 | 32.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 94 | 32.96 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 98 | 32.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 103 | 32.98 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 104 | 32.98 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 105 | 32.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 137 | 33.02 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 147 | 33.03 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 149 | 33.04 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 172 | 33.05 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 187 | 33.06 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 11 | 12 |
| 190 | 33.06 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 223 | 33.07 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 238 | 33.08 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 255 | 33.08 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 266 | 33.09 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 373 | 33.12 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 380 | 33.12 | wind | 7.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 391 | 33.12 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 520 | 33.14 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 8 | 16 |
| 533 | 33.15 | wind | 5.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 564 | 33.15 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 570 | 33.15 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 7 | 5 |
| 591 | 33.15 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 10 | 14 |
| 761 | 33.17 | atmosphere | 1000.0 | 14400 | > th | dose dependent | no | NA | NA |
| 762 | 33.17 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 763 | 33.17 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 817 | 33.17 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 846 | 33.18 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 890 | 33.19 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 919 | 33.19 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 964 | 33.20 | wind | 5.0 | 43200 | > th | dose independent | rect. | 23 | 1 |