Os01g0578800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0578800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.7 | 0.375 | 3.02 | 0.289 | 0.0347 | 0.246 | -0.344 | -1.44 | 0.129 | 5.41 | 2.012 | 3040 | -- | -- |
| 64.95 | 0.375 | 3.02 | 0.171 | 0.0376 | 0.438 | -0.562 | -- | 0.144 | 5 | 0.07062 | 3002 | -- | -- |
| 63.94 | 0.372 | 3.01 | 0.299 | 0.0228 | 0.255 | -- | -1.55 | 0.139 | 5.54 | 2.123 | 3058 | -- | -- |
| 65.6 | 0.377 | 3.02 | 0.148 | 0.0116 | 0.435 | -- | -- | 0.104 | 4.5 | 0.1686 | 3019 | -- | -- |
| 63.98 | 0.373 | 3.01 | 0.305 | -- | 0.266 | -- | -1.59 | 0.138 | -- | 2.175 | 3057 | -- | -- |
| 65.91 | 0.381 | 3.05 | 0.0186 | 0.0643 | -- | -0.611 | -- | 0.0361 | 3.28 | -- | -- | -- | -- |
| 67.09 | 0.384 | 3.05 | 0.0305 | 0.0646 | -- | -- | -- | 0.0396 | 4.16 | -- | -- | -- | -- |
| 65.56 | 0.377 | 3.03 | 0.146 | -- | 0.399 | -- | -- | 0.105 | -- | 0.07001 | 3024 | -- | -- |
| 66.01 | 0.378 | 3.02 | -- | 0.0298 | 0.335 | -- | -- | 0.0794 | 4.2 | 0.18 | 3026 | -- | -- |
| 67.32 | 0.383 | 3.05 | 0.0331 | -- | -- | -- | -- | 0.0413 | -- | -- | -- | -- | -- |
| 67.12 | 0.383 | 3.05 | -- | 0.0652 | -- | -- | -- | 0.0362 | 4.15 | -- | -- | -- | -- |
| 65.98 | 0.378 | 3.03 | -- | -- | 0.324 | -- | -- | 0.0834 | -- | 0.12 | 3026 | -- | -- |
| 67.35 | 0.383 | 3.05 | -- | -- | -- | -- | -- | 0.0376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.03 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 2 | 59.23 | temperature | 15.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 6 | 59.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 10 | 59.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 16 | 59.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 17 | 59.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 37 | 59.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 40 | 59.32 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 45 | 59.37 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 47 | 59.39 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 51 | 59.41 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 53 | 59.43 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 54 | 59.43 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 58 | 59.45 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 59 | 59.46 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 60 | 59.46 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 61 | 59.46 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 64 | 59.49 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 69 | 59.51 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 74 | 59.52 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 76 | 59.52 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 77 | 59.52 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 81 | 59.52 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 83 | 59.52 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 88 | 59.52 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 90 | 59.52 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 95 | 59.52 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 96 | 59.53 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 99 | 59.55 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 103 | 59.58 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 108 | 59.66 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 112 | 59.69 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 128 | 59.94 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 165 | 60.13 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 169 | 60.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 170 | 60.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 193 | 61.53 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 194 | 61.53 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 196 | 61.65 | humidity | 50.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 198 | 61.74 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 4 |
| 201 | 61.80 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 4 |
| 206 | 61.88 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 209 | 61.94 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 5 |
| 221 | 62.09 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 223 | 62.09 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 225 | 62.10 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 227 | 62.10 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 244 | 62.22 | humidity | 80.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 245 | 62.22 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 269 | 62.30 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 24 | 1 |
| 277 | 62.34 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 285 | 62.40 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 292 | 62.49 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 1 |
| 293 | 62.49 | radiation | 10.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 296 | 62.52 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 299 | 62.56 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 314 | 62.58 | temperature | 15.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 347 | 62.67 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 349 | 62.69 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 350 | 62.69 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 351 | 62.70 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 357 | 62.72 | wind | 7.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 360 | 62.72 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 361 | 62.72 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 364 | 62.72 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 365 | 62.72 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 370 | 62.72 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 371 | 62.72 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 372 | 62.72 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 377 | 62.72 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 383 | 62.77 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 384 | 62.77 | temperature | 25.0 | 10 | > th | dose independent | rect. | 24 | 1 |
| 388 | 62.81 | wind | 9.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 396 | 62.82 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 406 | 62.89 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 408 | 62.91 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 409 | 62.91 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 413 | 62.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 416 | 62.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 420 | 62.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 430 | 62.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 431 | 62.93 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 452 | 62.93 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 473 | 62.93 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 483 | 62.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 486 | 62.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 522 | 62.96 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 530 | 62.97 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 562 | 63.01 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 564 | 63.01 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 613 | 63.05 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 744 | 63.11 | temperature | 30.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 770 | 63.12 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 772 | 63.13 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |