Os01g0578600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0578600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.51 | 0.576 | 5.23 | 0.295 | 0.49 | -0.919 | 0.206 | -0.153 | 0.449 | 15.3 | 21.91 | 677 | -- | -- |
| 150.59 | 0.572 | 5.22 | 0.343 | 0.487 | -0.918 | 0.199 | -- | 0.461 | 15.2 | 21.98 | 682 | -- | -- |
| 150.64 | 0.572 | 5.23 | 0.301 | 0.489 | -0.921 | -- | -0.15 | 0.451 | 15.3 | 21.93 | 682 | -- | -- |
| 150.71 | 0.572 | 5.22 | 0.347 | 0.489 | -0.919 | -- | -- | 0.462 | 15.3 | 21.96 | 682 | -- | -- |
| 161.53 | 0.592 | 5.21 | 0.305 | -- | -0.927 | -- | -0.0648 | 0.481 | -- | 22.3 | 843 | -- | -- |
| 186.48 | 0.64 | 5.28 | 0.0317 | 0.513 | -- | 0.213 | -- | 0.169 | 13.9 | -- | -- | -- | -- |
| 186.65 | 0.64 | 5.28 | 0.0383 | 0.514 | -- | -- | -- | 0.171 | 13.9 | -- | -- | -- | -- |
| 161.57 | 0.592 | 5.22 | 0.314 | -- | -0.926 | -- | -- | 0.478 | -- | 22.4 | 850 | -- | -- |
| 153.24 | 0.577 | 5.23 | -- | 0.469 | -0.813 | -- | -- | 0.419 | 15.1 | 22.3 | 700 | -- | -- |
| 202.59 | 0.665 | 5.29 | 0.0171 | -- | -- | -- | -- | 0.159 | -- | -- | -- | -- | -- |
| 186.69 | 0.639 | 5.28 | -- | 0.513 | -- | -- | -- | 0.166 | 13.9 | -- | -- | -- | -- |
| 164.03 | 0.596 | 5.23 | -- | -- | -0.874 | -- | -- | 0.427 | -- | 22.37 | 850 | -- | -- |
| 202.6 | 0.664 | 5.29 | -- | -- | -- | -- | -- | 0.157 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.09 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 8 | 152.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 26 | 152.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 50 | 152.94 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 53 | 152.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 55 | 153.02 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 77 | 153.31 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 104 | 153.57 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 105 | 153.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 191 | 154.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 244 | 155.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 245 | 155.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 270 | 155.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 368 | 155.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 546 | 155.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 605 | 156.11 | temperature | 25 | 270 | < th | dose dependent | sin | 7 | NA |
| 730 | 156.42 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 770 | 156.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 817 | 156.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 13 |