Os01g0577600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os01g0577600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.14 | 0.627 | 4.75 | 0.37 | 1.05 | 0.169 | 1.17 | -3.3 | -0.0994 | 3.35 | 0.03185 | 4570 | -- | -- |
| 181.01 | 0.627 | 4.7 | 0.512 | 1.02 | -0.684 | 1.06 | -- | -0.164 | 3.39 | 0.5788 | 17485 | -- | -- |
| 182.4 | 0.629 | 4.75 | 0.348 | 1.06 | 0.164 | -- | -3.13 | -0.101 | 3.42 | 0.02649 | 4863 | -- | -- |
| 184.56 | 0.633 | 4.7 | 0.488 | 1.01 | -0.68 | -- | -- | -0.166 | 3.47 | 0.5716 | 17498 | -- | -- |
| 244.78 | 0.729 | 4.74 | 0.372 | -- | 0.137 | -- | -2.85 | -0.0747 | -- | 0.01299 | 4447 | -- | -- |
| 191.27 | 0.648 | 4.69 | 0.223 | 1.03 | -- | 1.07 | -- | -0.101 | 3.39 | -- | -- | -- | -- |
| 194.85 | 0.654 | 4.69 | 0.204 | 1.04 | -- | -- | -- | -0.107 | 3.5 | -- | -- | -- | -- |
| 243.52 | 0.727 | 4.7 | 0.524 | -- | -0.695 | -- | -- | -0.148 | -- | 0.4772 | 17364 | -- | -- |
| 188.57 | 0.64 | 4.72 | -- | 1.05 | -0.487 | -- | -- | -0.237 | 3.54 | 0.2511 | 13089 | -- | -- |
| 255.15 | 0.746 | 4.69 | 0.247 | -- | -- | -- | -- | -0.0794 | -- | -- | -- | -- | -- |
| 195.95 | 0.655 | 4.7 | -- | 1.04 | -- | -- | -- | -0.13 | 3.5 | -- | -- | -- | -- |
| 248.54 | 0.734 | 4.73 | -- | -- | -0.559 | -- | -- | -0.229 | -- | 0.3097 | 17248 | -- | -- |
| 256.76 | 0.748 | 4.7 | -- | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.23 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 2 | 171.27 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 3 | 171.57 | wind | 7.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 4 | 171.77 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 6 | 171.91 | wind | 7.0 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 9 | 172.22 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 10 | 172.24 | wind | 7.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 12 | 172.35 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 18 | 172.47 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 24 | 172.62 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 40 | 172.64 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 57 | 172.82 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 8 |
| 85 | 173.16 | wind | 7.0 | 43200 | > th | dose independent | rect. | 1 | 17 |
| 87 | 173.17 | wind | 7.0 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 93 | 173.22 | wind | 7.0 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 98 | 173.23 | wind | 7.0 | 43200 | < th | dose independent | rect. | 1 | 17 |
| 103 | 173.25 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 18 |
| 126 | 173.35 | wind | 7.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 145 | 173.39 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 160 | 173.46 | wind | 7.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 169 | 173.48 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 177 | 173.52 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 178 | 173.52 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 241 | 173.65 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 15 |
| 292 | 173.77 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 15 |
| 315 | 173.83 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 388 | 174.01 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 482 | 174.25 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 528 | 174.34 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 538 | 174.35 | wind | 7.0 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 551 | 174.39 | wind | 7.0 | 43200 | > th | dose independent | no | NA | NA |
| 555 | 174.39 | wind | 7.0 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 573 | 174.44 | wind | 7.0 | 43200 | < th | dose independent | no | NA | NA |
| 597 | 174.50 | wind | 3.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 611 | 174.53 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 617 | 174.56 | wind | 7.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 619 | 174.57 | wind | 3.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 627 | 174.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 19 |
| 664 | 174.67 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 694 | 174.73 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 719 | 174.83 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 1 | 17 |
| 723 | 174.84 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 3 | 15 |
| 791 | 175.01 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 840 | 175.11 | wind | 5.0 | 43200 | > th | dose dependent | sin | 22 | NA |
| 848 | 175.13 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 868 | 175.18 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 889 | 175.22 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 8 |
| 907 | 175.27 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 918 | 175.31 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 956 | 175.40 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 21 | 3 |