Os01g0575200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0575200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 213.25 | 0.686 | 10.1 | 2.52 | 1.02 | -1.38 | 0.589 | 0.348 | 0.881 | 0.623 | 10.04 | 1438 | -- | -- |
| 213.49 | 0.681 | 10.1 | 2.48 | 1.03 | -1.38 | 0.623 | -- | 0.881 | 0.611 | 10.2 | 1440 | -- | -- |
| 214.65 | 0.682 | 10.1 | 2.51 | 1.02 | -1.37 | -- | 0.42 | 0.879 | 0.733 | 10.04 | 1436 | -- | -- |
| 214.95 | 0.683 | 10.1 | 2.45 | 1.03 | -1.38 | -- | -- | 0.878 | 0.741 | 10.03 | 1436 | -- | -- |
| 248.5 | 0.734 | 10.1 | 2.53 | -- | -1.77 | -- | 0.0262 | 0.779 | -- | 10 | 1665 | -- | -- |
| 267.5 | 0.767 | 10.2 | 2.03 | 0.964 | -- | 0.341 | -- | 0.446 | 0.604 | -- | -- | -- | -- |
| 267.98 | 0.767 | 10.2 | 2.01 | 0.964 | -- | -- | -- | 0.444 | 0.684 | -- | -- | -- | -- |
| 246.56 | 0.731 | 10.1 | 2.46 | -- | -1.91 | -- | -- | 0.912 | -- | 10 | 1680 | -- | -- |
| 318.21 | 0.831 | 10.1 | -- | 1.69 | -2.12 | -- | -- | 0.58 | 23.7 | 8.18 | 1240 | -- | -- |
| 326.18 | 0.844 | 10.2 | 2.05 | -- | -- | -- | -- | 0.461 | -- | -- | -- | -- | -- |
| 374.73 | 0.906 | 10.2 | -- | 0.996 | -- | -- | -- | 0.219 | 0.78 | -- | -- | -- | -- |
| 374.8 | 0.905 | 10.2 | -- | -- | -0.76 | -- | -- | 0.227 | -- | 8.18 | 1240 | -- | -- |
| 436.71 | 0.975 | 10.2 | -- | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 210.05 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 3 | 210.50 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 30 | 211.64 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 33 | 212.03 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 35 | 212.07 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 39 | 212.10 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 54 | 212.25 | radiation | 10 | 1440 | > th | dose independent | sin | 23 | NA |
| 59 | 212.46 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 62 | 212.50 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 84 | 213.23 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 96 | 213.27 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 177 | 213.38 | radiation | 20 | 1440 | < th | dose dependent | sin | 21 | NA |
| 214 | 213.89 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 223 | 214.13 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 234 | 214.24 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 243 | 214.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 253 | 214.97 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 343 | 215.76 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 372 | 215.99 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 415 | 216.30 | radiation | 20 | 1440 | < th | dose dependent | rect. | 3 | 15 |
| 425 | 216.34 | radiation | 20 | 1440 | < th | dose dependent | rect. | 21 | 21 |
| 427 | 216.35 | radiation | 20 | 1440 | < th | dose dependent | rect. | 23 | 19 |
| 432 | 216.36 | radiation | 20 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 464 | 216.41 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 474 | 216.44 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 514 | 216.64 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 516 | 216.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 565 | 217.22 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 16 |
| 579 | 217.35 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 585 | 217.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 590 | 217.39 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 597 | 217.41 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 17 |
| 619 | 217.51 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 624 | 217.53 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 658 | 217.63 | humidity | 50 | 720 | > th | dose dependent | sin | 18 | NA |
| 733 | 217.86 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 752 | 217.89 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 768 | 217.91 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 856 | 218.13 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 873 | 218.25 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 958 | 218.38 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 988 | 218.50 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 4 |