Os01g0571100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ZmGR2a protein.
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Os01g0571100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ZmGR2a protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.25 | 0.413 | 11.7 | -2.55 | 0.818 | 1.63 | -0.41 | -2.59 | -0.0412 | 14.5 | 21.59 | 1263 | -- | -- |
| 81.59 | 0.421 | 11.6 | -1.83 | 0.841 | 1.52 | -0.195 | -- | 0.157 | 14.3 | 20.3 | 1177 | -- | -- |
| 77.82 | 0.411 | 11.7 | -2.53 | 0.814 | 1.62 | -- | -2.47 | -0.0328 | 14.5 | 21.66 | 1271 | -- | -- |
| 81.76 | 0.421 | 11.6 | -1.83 | 0.847 | 1.54 | -- | -- | 0.153 | 14.2 | 20.37 | 1173 | -- | -- |
| 98.24 | 0.462 | 11.6 | -2.13 | -- | 1.83 | -- | -2.16 | 0.0819 | -- | 18.93 | 250 | -- | -- |
| 148.19 | 0.571 | 11.5 | -1.31 | 0.608 | -- | -0.376 | -- | 0.492 | 14.8 | -- | -- | -- | -- |
| 148.67 | 0.571 | 11.5 | -1.31 | 0.608 | -- | -- | -- | 0.49 | 14.8 | -- | -- | -- | -- |
| 101.67 | 0.47 | 11.6 | -1.74 | -- | 1.81 | -- | -- | 0.198 | -- | 17.53 | 252 | -- | -- |
| 159.88 | 0.589 | 11.5 | -- | 0.808 | 1 | -- | -- | 0.462 | 14.4 | 22 | 1172 | -- | -- |
| 170.05 | 0.609 | 11.5 | -1.34 | -- | -- | -- | -- | 0.474 | -- | -- | -- | -- | -- |
| 194.17 | 0.652 | 11.5 | -- | 0.634 | -- | -- | -- | 0.636 | 14.9 | -- | -- | -- | -- |
| 175.43 | 0.617 | 11.5 | -- | -- | 1.26 | -- | -- | 0.449 | -- | 20.48 | 250 | -- | -- |
| 217.41 | 0.688 | 11.5 | -- | -- | -- | -- | -- | 0.623 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 2 | 74.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 4 | 74.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 76 | 76.72 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 273 | 79.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 343 | 79.95 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 365 | 80.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 406 | 80.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 853 | 83.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 974 | 84.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 976 | 84.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |