Os01g0571000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os01g0571000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.91 | 0.448 | 8.23 | -1.15 | 1.19 | -1.9 | 0.665 | -0.0684 | 0.0244 | 7.79 | 25.9 | 10 | -- | -- |
| 90.45 | 0.446 | 8.23 | -1.16 | 1.18 | -1.89 | 0.676 | -- | 0.0245 | 7.79 | 25.9 | 10 | -- | -- |
| 91.62 | 0.449 | 8.23 | -1.1 | 1.18 | -1.88 | -- | -0.248 | 0.0378 | 7.86 | 25.9 | 10 | -- | -- |
| 91.73 | 0.449 | 8.23 | -1.13 | 1.18 | -1.87 | -- | -- | 0.0298 | 7.88 | 25.9 | 10 | -- | -- |
| 163.58 | 0.599 | 8.24 | -1.08 | -- | -2.19 | -- | -0.695 | 0.088 | -- | 24.42 | 7 | -- | -- |
| 143.89 | 0.562 | 8.14 | -0.709 | 1.29 | -- | 0.294 | -- | 0.429 | 9.22 | -- | -- | -- | -- |
| 144.19 | 0.562 | 8.14 | -0.698 | 1.28 | -- | -- | -- | 0.429 | 9.25 | -- | -- | -- | -- |
| 164.16 | 0.599 | 8.26 | -1.18 | -- | -2.1 | -- | -- | 0.047 | -- | 24.79 | 7 | -- | -- |
| 122.65 | 0.519 | 8.18 | -- | 1.18 | -1.44 | -- | -- | 0.235 | 8.27 | 25.9 | 10 | -- | -- |
| 239.91 | 0.724 | 8.17 | -0.703 | -- | -- | -- | -- | 0.435 | -- | -- | -- | -- | -- |
| 157.04 | 0.586 | 8.12 | -- | 1.28 | -- | -- | -- | 0.507 | 9.29 | -- | -- | -- | -- |
| 197.79 | 0.657 | 8.22 | -- | -- | -1.71 | -- | -- | 0.224 | -- | 25.1 | 2 | -- | -- |
| 252.96 | 0.742 | 8.15 | -- | -- | -- | -- | -- | 0.513 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.85 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 2 | 91.56 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 3 | 91.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 5 | 91.72 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 6 | 91.78 | temperature | 20 | 720 | > th | dose dependent | sin | 16 | NA |
| 8 | 91.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 9 | 91.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 10 | 91.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 11 | 91.90 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 12 | 91.91 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 14 | 91.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 17 | 92.01 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 20 | 92.07 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 22 | 92.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 24 | 92.14 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 29 | 92.32 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 48 | 92.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 52 | 92.63 | temperature | 10 | 720 | > th | dose dependent | sin | 16 | NA |
| 69 | 92.93 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 73 | 93.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 79 | 93.17 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 88 | 93.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 16 |
| 89 | 93.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 146 | 94.26 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 167 | 94.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 14 |
| 193 | 94.73 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 211 | 94.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 11 |
| 231 | 95.16 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 240 | 95.27 | temperature | 20 | 10 | > th | dose dependent | sin | 11 | NA |
| 256 | 95.38 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 257 | 95.40 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 274 | 95.61 | temperature | 10 | 10 | > th | dose dependent | sin | 11 | NA |
| 287 | 95.76 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 12 |
| 296 | 95.87 | temperature | 30 | 10 | < th | dose dependent | sin | 11 | NA |
| 311 | 96.06 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 16 |
| 323 | 96.13 | temperature | 25 | 720 | < th | dose independent | sin | 18 | NA |
| 326 | 96.14 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 16 |
| 346 | 96.29 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 13 |
| 351 | 96.31 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 354 | 96.31 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 10 |
| 394 | 96.50 | wind | 7 | 43200 | < th | dose independent | sin | 16 | NA |
| 396 | 96.50 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 399 | 96.51 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 401 | 96.52 | wind | 7 | 43200 | > th | dose independent | sin | 16 | NA |
| 403 | 96.52 | wind | 5 | 43200 | > th | dose dependent | sin | 16 | NA |
| 413 | 96.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 452 | 96.65 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 453 | 96.65 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 12 |
| 454 | 96.65 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 15 |
| 459 | 96.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 464 | 96.68 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 611 | 97.09 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 689 | 97.28 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 771 | 97.47 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 850 | 97.61 | temperature | 25 | 720 | < th | dose independent | rect. | 13 | 10 |
| 963 | 97.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 20 |