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Os01g0570500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dual specificity kinase 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0106) R2 : 0.235
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.264 (0.0223) R2dN8 : 0.303 R2N8 : 0.235
σ : 0.2
deviance : 18.29
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
9.74 0.147 11.9 -0.0146 0.191 0.241 0.247 0.0668 0.28 5.78 71.04 28 -- --
9.75 0.145 11.9 -0.0121 0.193 0.237 0.276 -- 0.281 5.65 71.37 27 -- --
9.87 0.146 11.9 -0.0136 0.188 0.247 -- 0.127 0.279 5.9 70.44 27 -- --
9.94 0.147 11.9 -0.0103 0.187 0.252 -- -- 0.281 5.92 70.99 27 -- --
10.81 0.153 11.9 -0.0306 -- 0.369 -- 0.171 0.291 -- 68.7 214 -- --
11.16 0.157 12 -0.00533 0.353 -- 0.335 -- 0.257 4.21 -- -- -- --
11.48 0.159 12 -0.00876 0.355 -- -- -- 0.255 4.21 -- -- -- --
10.89 0.154 11.9 -0.0169 -- 0.377 -- -- 0.288 -- 68.96 228 -- --
9.94 0.147 11.9 -- 0.187 0.252 -- -- 0.282 5.92 70.92 27 -- --
18.29 0.2 12 0.00548 -- -- -- -- 0.265 -- -- -- -- --
11.48 0.158 12 -- 0.355 -- -- -- 0.256 4.21 -- -- -- --
10.9 0.154 11.9 -- -- 0.378 -- -- 0.291 -- 68.91 228 -- --
18.29 0.2 12 -- -- -- -- -- 0.264 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 9.52 humidity 70 270 > th dose dependent rect. 8 21
2 9.56 humidity 80 270 > th dose independent rect. 8 21
11 9.64 humidity 70 30 > th dose dependent rect. 21 23
33 9.75 humidity 70 30 > th dose dependent no NA NA
35 9.75 humidity 70 30 > th dose dependent rect. 11 23
36 9.75 humidity 70 30 > th dose dependent rect. 13 23
37 9.75 humidity 70 30 > th dose dependent rect. 15 23
39 9.76 humidity 70 720 > th dose dependent rect. 10 4
45 9.76 humidity 70 30 > th dose dependent rect. 17 23
68 9.80 humidity 70 720 > th dose dependent rect. 9 6
78 9.81 humidity 70 720 > th dose dependent rect. 11 2
83 9.82 humidity 70 43200 < th dose dependent rect. 9 1
88 9.83 humidity 80 30 > th dose independent rect. 21 23
101 9.85 humidity 70 90 > th dose dependent rect. 10 9
116 9.87 humidity 80 10 > th dose independent rect. 10 21
149 9.90 humidity 70 90 > th dose dependent rect. 1 23
157 9.91 humidity 80 30 > th dose independent rect. 21 21
171 9.92 humidity 80 720 > th dose independent rect. 10 4
174 9.92 humidity 80 30 > th dose dependent sin 22 NA
197 9.93 humidity 80 30 < th dose independent rect. 17 23
200 9.93 humidity 70 90 > th dose dependent rect. 11 6
219 9.94 humidity 60 43200 < th dose dependent rect. 14 1
270 9.96 humidity 50 43200 > th dose independent rect. 14 3
272 9.96 humidity 80 10 > th dose independent rect. 11 7
276 9.96 humidity 80 270 < th dose independent rect. 7 20
283 9.96 humidity 60 43200 < th dose dependent rect. 12 4
305 9.97 humidity 80 4320 > th dose independent rect. 10 1
316 9.97 temperature 15 90 > th dose dependent rect. 6 15
317 9.97 temperature 20 10 > th dose dependent rect. 7 15
349 9.98 temperature 25 90 > th dose dependent rect. 17 23
353 9.99 humidity 60 43200 > th dose independent rect. 9 1
354 9.99 humidity 80 270 > th dose independent rect. 8 11
364 9.99 humidity 70 4320 > th dose dependent rect. 10 1
385 10.00 humidity 80 30 > th dose independent no NA NA
386 10.00 humidity 60 43200 > th dose independent rect. 8 4
387 10.00 humidity 70 90 > th dose independent rect. 10 7
401 10.00 humidity 80 30 > th dose independent rect. 15 23
402 10.00 humidity 80 270 > th dose independent rect. 17 23
403 10.00 humidity 80 30 > th dose independent rect. 19 23
406 10.00 humidity 80 270 < th dose independent rect. 11 23
407 10.00 humidity 70 4320 > th dose dependent rect. 9 3
442 10.01 humidity 80 30 > th dose independent rect. 13 23
443 10.01 humidity 80 30 > th dose independent rect. 17 23
447 10.01 humidity 80 270 < th dose independent rect. 16 23
448 10.01 humidity 80 270 < th dose independent rect. 22 23
449 10.01 humidity 80 270 < th dose independent rect. 24 23
475 10.01 temperature 25 10 > th dose dependent rect. 12 23
481 10.02 humidity 80 270 < th dose independent no NA NA
482 10.02 wind 5 1440 < th dose independent rect. 14 1
483 10.02 humidity 80 4320 < th dose independent rect. 10 1
502 10.02 humidity 80 270 > th dose independent rect. 24 23
506 10.02 humidity 80 30 < th dose independent rect. 19 23
533 10.03 humidity 80 270 > th dose independent no NA NA
534 10.03 wind 5 1440 > th dose independent rect. 14 1
536 10.03 humidity 60 43200 < th dose independent rect. 9 3
556 10.03 humidity 80 270 > th dose independent rect. 21 23
561 10.03 humidity 60 43200 < th dose dependent sin 22 NA
602 10.04 humidity 50 43200 > th dose independent rect. 15 1
618 10.04 humidity 80 10 > th dose independent rect. 2 23
624 10.04 humidity 80 270 < th dose independent rect. 14 23
635 10.04 temperature 30 270 < th dose dependent rect. 10 7
669 10.04 humidity 60 720 > th dose dependent rect. 24 16
686 10.04 temperature 25 30 > th dose dependent rect. 19 21
709 10.05 humidity 80 270 > th dose independent rect. 13 23
911 10.07 humidity 80 720 < th dose independent rect. 8 8
930 10.07 humidity 60 43200 < th dose dependent no NA NA
995 10.08 humidity 70 4320 > th dose dependent rect. 8 6