Os01g0567600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monosaccharide transporter 3.
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Os01g0567600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monosaccharide transporter 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.86 | 0.726 | 5.21 | 1.79 | 1.7 | -2.48 | 0.976 | -1.32 | 0.0297 | 7.12 | 21.6 | 1449 | -- | -- |
| 238.07 | 0.719 | 5.16 | 1.98 | 1.7 | -2.25 | 0.989 | -- | 0.141 | 7.15 | 22.05 | 1500 | -- | -- |
| 240.39 | 0.722 | 5.2 | 1.84 | 1.69 | -2.39 | -- | -1 | 0.0545 | 7.15 | 21.8 | 1526 | -- | -- |
| 240.93 | 0.723 | 5.16 | 2 | 1.72 | -2.23 | -- | -- | 0.13 | 7.1 | 22.01 | 1490 | -- | -- |
| 354.88 | 0.877 | 5.23 | 1.69 | -- | -2.13 | -- | -0.655 | 0.0722 | -- | 22.1 | 660 | -- | -- |
| 413.24 | 0.953 | 5.32 | 1.14 | 1.67 | -- | 1 | -- | -0.588 | 7.26 | -- | -- | -- | -- |
| 415.93 | 0.955 | 5.32 | 1.17 | 1.68 | -- | -- | -- | -0.59 | 7.24 | -- | -- | -- | -- |
| 355.92 | 0.879 | 5.21 | 1.9 | -- | -2.12 | -- | -- | 0.123 | -- | 22.07 | 652 | -- | -- |
| 331.54 | 0.848 | 5.23 | -- | 1.74 | -1.71 | -- | -- | -0.19 | 6.97 | 22.3 | 1382 | -- | -- |
| 564.81 | 1.11 | 5.36 | 1.2 | -- | -- | -- | -- | -0.561 | -- | -- | -- | -- | -- |
| 451.74 | 0.994 | 5.35 | -- | 1.69 | -- | -- | -- | -0.72 | 7.2 | -- | -- | -- | -- |
| 443.95 | 0.981 | 5.28 | -- | -- | -1.75 | -- | -- | -0.173 | -- | 22.2 | 645 | -- | -- |
| 602.51 | 1.15 | 5.39 | -- | -- | -- | -- | -- | -0.694 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 242.09 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 3 | 243.24 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 4 | 243.96 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 19 | 246.57 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 20 | 246.74 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 25 | 247.08 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 27 | 247.23 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 29 | 247.45 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 32 | 247.67 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 39 | 248.14 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 43 | 248.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 52 | 248.83 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 58 | 249.05 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 67 | 249.61 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 68 | 249.70 | temperature | 15.0 | 10 | > th | dose dependent | no | NA | NA |
| 73 | 249.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 81 | 250.22 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 98 | 251.08 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 109 | 251.45 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 152 | 252.72 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 153 | 252.74 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 239 | 255.50 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 243 | 255.64 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 254 | 255.99 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 255 | 256.02 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 274 | 256.46 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 330 | 258.02 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 350 | 258.28 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 390 | 258.85 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 399 | 258.99 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 404 | 259.05 | temperature | 15.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 417 | 259.25 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 448 | 259.53 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 745 | 262.97 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 767 | 263.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 778 | 263.37 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 842 | 264.14 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 845 | 264.22 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 943 | 265.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |