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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0567500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Monosaccharide transporter 3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0459) R2 : 0.000507
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0465 (0.0967) R2dN8 : 0.000654 R2N8 : 0.000507
σ : 0.865
deviance : 343.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
323.04 0.844 2.97 0.085 1.93 2.36 1.87 0.514 0.135 17.1 1.51 713 -- --
323.06 0.837 2.97 0.0976 1.94 2.36 1.49 -- 0.138 17.1 1.52 710 -- --
324.67 0.839 2.96 0.106 1.52 1.78 -- -1.27 0.159 16.7 1.574 680 -- --
328.56 0.844 2.97 0.0921 1.9 2.28 -- -- 0.15 17 1.52 705 -- --
334.64 0.852 2.87 0.227 -- 1.07 -- -1.54 0.297 -- 1.83 1347 -- --
337.66 0.861 2.95 -0.0355 0.294 -- 0.276 -- 0.0463 12.6 -- -- -- --
337.84 0.861 2.95 -0.0264 0.296 -- -- -- 0.0466 12 -- -- -- --
329.06 0.845 2.93 0.0772 -- 0.901 -- -- 0.162 -- 1.8 1332 -- --
328.7 0.844 2.96 -- 1.81 2.16 -- -- 0.135 17 1.52 701 -- --
343.36 0.866 2.96 -0.0355 -- -- -- -- 0.0425 -- -- -- -- --
337.86 0.86 2.95 -- 0.297 -- -- -- 0.0495 12 -- -- -- --
329.25 0.845 2.93 -- -- 0.893 -- -- 0.155 -- 1.82 1332 -- --
343.4 0.865 2.96 -- -- -- -- -- 0.0465 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 318.44 wind 1.0 90 < th dose dependent rect. 24 1
2 321.89 temperature 25.0 270 > th dose dependent rect. 9 1
3 322.50 wind 1.0 90 < th dose independent rect. 24 1
4 322.54 radiation 1.0 720 > th dose independent rect. 7 23
5 322.85 radiation 1.0 720 < th dose independent rect. 14 16
7 322.93 radiation 1.0 720 > th dose independent sin 23 NA
10 323.06 radiation 1.0 720 < th dose independent rect. 7 23
11 323.13 radiation 1.0 720 < th dose independent rect. 11 19
14 323.18 radiation 1.0 720 > th dose independent rect. 10 23
16 323.21 radiation 1.0 720 < th dose independent rect. 22 23
17 323.31 temperature 30.0 10 < th dose independent sin 22 NA
24 323.54 radiation 1.0 720 > th dose independent rect. 7 10
25 323.63 radiation 1.0 720 < th dose independent rect. 1 23
26 323.70 wind 1.0 10 < th dose independent rect. 13 1
28 323.70 wind 1.0 10 < th dose dependent rect. 13 1
31 323.78 radiation 1.0 720 > th dose independent rect. 13 23
32 323.85 temperature 25.0 270 > th dose dependent rect. 1 9
36 323.94 radiation 1.0 720 < th dose independent rect. 19 23
40 324.02 temperature 25.0 270 > th dose dependent rect. 6 4
56 324.13 radiation 1.0 720 > th dose independent rect. 10 20
60 324.16 radiation 1.0 720 < th dose dependent rect. 22 23
61 324.17 precipitation 0.1 10 > th dose independent rect. 5 17
62 324.17 precipitation 0.1 10 > th dose dependent rect. 5 17
67 324.22 radiation 1.0 720 < th dose independent sin 1 NA
71 324.25 radiation 1.0 720 > th dose independent rect. 7 12
81 324.25 radiation 1.0 720 < th dose dependent rect. 14 16
83 324.28 radiation 1.0 720 < th dose independent no NA NA
91 324.32 radiation 1.0 720 > th dose independent rect. 5 14
101 324.33 radiation 1.0 720 < th dose independent sin 14 NA
103 324.34 atmosphere 1005.0 720 > th dose dependent rect. 11 1
104 324.36 radiation 1.0 720 > th dose independent no NA NA
154 324.39 radiation 1.0 720 < th dose dependent rect. 7 22
155 324.39 radiation 1.0 720 < th dose dependent rect. 1 23
158 324.41 atmosphere 1005.0 720 > th dose dependent rect. 10 3
160 324.42 radiation 1.0 720 > th dose independent rect. 13 17
162 324.42 radiation 1.0 720 < th dose dependent rect. 11 19
168 324.44 radiation 1.0 720 < th dose dependent rect. 19 23
169 324.47 radiation 1.0 720 < th dose dependent sin 1 NA
184 324.70 radiation 1.0 720 < th dose independent rect. 1 19
190 324.80 radiation 1.0 720 < th dose independent rect. 17 23
191 324.81 radiation 1.0 720 < th dose independent rect. 4 23
193 324.82 radiation 1.0 720 < th dose independent rect. 4 14
194 324.82 radiation 1.0 720 > th dose independent rect. 13 19
211 324.88 radiation 1.0 1440 > th dose independent rect. 9 1
213 324.88 radiation 1.0 720 < th dose dependent rect. 15 1
222 324.92 radiation 1.0 720 < th dose independent rect. 1 17
224 324.93 radiation 1.0 720 < th dose independent rect. 3 16
234 324.99 radiation 1.0 720 < th dose independent rect. 14 13
244 325.06 radiation 1.0 720 > th dose independent sin 13 NA
249 325.10 radiation 1.0 720 < th dose dependent no NA NA
258 325.16 radiation 10.0 1440 < th dose independent rect. 19 10
273 325.19 radiation 1.0 720 < th dose dependent rect. 4 14
276 325.22 atmosphere 1000.0 43200 < th dose dependent rect. 6 4
286 325.28 wind 5.0 270 < th dose independent rect. 9 1
287 325.30 atmosphere 995.0 43200 > th dose independent rect. 15 22
289 325.32 atmosphere 995.0 43200 < th dose independent rect. 15 22
291 325.33 atmosphere 1000.0 43200 < th dose dependent rect. 7 2
308 325.40 atmosphere 995.0 43200 < th dose independent rect. 12 22
317 325.44 radiation 1.0 720 < th dose dependent rect. 1 17
320 325.45 atmosphere 995.0 43200 > th dose independent rect. 18 23
321 325.45 radiation 1.0 720 < th dose dependent rect. 17 23
322 325.46 radiation 30.0 30 > th dose independent rect. 12 2
327 325.48 atmosphere 995.0 43200 > th dose independent rect. 21 20
332 325.49 atmosphere 1000.0 43200 < th dose dependent rect. 9 1
348 325.55 radiation 1.0 720 > th dose independent rect. 10 9
360 325.55 temperature 30.0 30 < th dose independent rect. 13 23
366 325.56 temperature 30.0 10 < th dose independent rect. 11 23
367 325.56 radiation 1.0 720 < th dose dependent rect. 1 19
370 325.57 radiation 1.0 720 < th dose dependent rect. 3 16
372 325.58 atmosphere 995.0 43200 > th dose independent rect. 12 23
375 325.59 atmosphere 995.0 43200 > th dose independent no NA NA
383 325.62 atmosphere 995.0 43200 > th dose independent rect. 7 23
385 325.62 radiation 1.0 720 > th dose independent rect. 17 23
386 325.63 atmosphere 995.0 43200 < th dose independent no NA NA
388 325.63 atmosphere 995.0 43200 < th dose independent rect. 21 22
389 325.63 atmosphere 995.0 43200 < th dose independent rect. 7 23
396 325.65 radiation 1.0 720 < th dose dependent sin 14 NA
400 325.66 temperature 30.0 10 > th dose independent rect. 18 19
417 325.71 atmosphere 995.0 43200 > th dose independent rect. 1 23
419 325.71 atmosphere 995.0 43200 > th dose independent rect. 4 23
430 325.74 radiation 10.0 1440 < th dose independent rect. 24 5
448 325.79 radiation 1.0 1440 > th dose independent rect. 9 4
449 325.79 radiation 1.0 720 < th dose dependent rect. 4 23
467 325.82 temperature 30.0 10 > th dose independent rect. 18 23
470 325.84 radiation 1.0 720 > th dose independent rect. 13 6
482 325.84 temperature 30.0 10 > th dose independent rect. 15 22
490 325.87 humidity 50.0 10 > th dose independent rect. 9 7
492 325.87 temperature 25.0 720 < th dose independent rect. 1 19
526 325.96 precipitation 0.1 10 < th dose independent sin 18 NA
529 325.96 precipitation 0.1 10 < th dose dependent sin 18 NA
572 326.04 wind 5.0 14400 < th dose independent rect. 8 1
573 326.04 radiation 1.0 1440 < th dose independent rect. 11 1
575 326.04 radiation 40.0 4320 > th dose dependent rect. 15 1
576 326.04 radiation 1.0 1440 < th dose dependent rect. 11 1
604 326.09 wind 5.0 14400 > th dose independent rect. 8 1
615 326.10 radiation 1.0 720 < th dose dependent rect. 22 20
618 326.12 radiation 1.0 1440 < th dose independent rect. 9 3
624 326.12 radiation 1.0 1440 < th dose dependent rect. 9 3
629 326.15 temperature 30.0 270 < th dose independent rect. 10 23
635 326.18 atmosphere 1005.0 10 > th dose dependent rect. 12 1
639 326.19 atmosphere 1005.0 90 < th dose dependent rect. 1 2
643 326.20 temperature 30.0 10 > th dose dependent rect. 12 1
646 326.21 radiation 1.0 720 > th dose independent rect. 16 14
650 326.21 radiation 10.0 1440 < th dose dependent rect. 19 10
705 326.34 humidity 50.0 10 > th dose independent rect. 9 5
713 326.36 radiation 1.0 1440 > th dose independent rect. 11 1
724 326.39 temperature 30.0 10 > th dose independent rect. 10 3
794 326.49 humidity 80.0 90 < th dose independent rect. 9 1
800 326.51 humidity 70.0 720 < th dose independent rect. 14 1
804 326.52 humidity 60.0 14400 > th dose independent rect. 24 8
836 326.60 temperature 25.0 720 > th dose independent rect. 24 19
843 326.61 atmosphere 995.0 43200 > th dose independent rect. 12 1
855 326.63 temperature 30.0 10 > th dose independent sin 1 NA
858 326.63 wind 9.0 270 < th dose dependent rect. 9 1
883 326.68 temperature 30.0 90 < th dose independent rect. 12 1
888 326.69 precipitation 0.1 10 > th dose independent rect. 5 15
890 326.69 wind 1.0 90 < th dose independent rect. 8 18
894 326.69 precipitation 0.1 10 > th dose dependent rect. 5 15
905 326.72 atmosphere 1005.0 270 < th dose independent rect. 23 2
907 326.73 radiation 1.0 720 < th dose independent rect. 14 2
911 326.73 atmosphere 995.0 43200 < th dose dependent rect. 14 1
920 326.76 temperature 30.0 10 > th dose independent rect. 9 8
942 326.76 wind 5.0 14400 > th dose dependent rect. 8 1
943 326.76 wind 7.0 43200 > th dose dependent rect. 19 1
947 326.78 atmosphere 995.0 43200 < th dose dependent rect. 14 10
950 326.79 temperature 25.0 720 > th dose independent rect. 24 22
956 326.80 temperature 25.0 720 > th dose independent rect. 21 22
988 326.86 radiation 20.0 10 > th dose dependent rect. 12 2