Os01g0566200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0566200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.3 | 0.343 | 3.03 | -0.0237 | 0.0855 | -0.508 | -0.0625 | 1.84 | 0.0494 | 7.02 | 50.34 | 8 | -- | -- |
| 54.48 | 0.344 | 3.03 | -0.0312 | 0.0857 | -0.222 | -0.0993 | -- | 0.0442 | 7.1 | 51 | 7 | -- | -- |
| 53.17 | 0.34 | 3.03 | -0.0184 | 0.0858 | -0.496 | -- | 1.79 | 0.0501 | 6.9 | 50.16 | 6 | -- | -- |
| 54.48 | 0.344 | 3.02 | -0.0341 | 0.0859 | -0.233 | -- | -- | 0.0448 | 7.03 | 51.95 | 6 | -- | -- |
| 53.54 | 0.341 | 3.03 | -0.0189 | -- | -0.472 | -- | 1.75 | 0.0517 | -- | 50.38 | 6 | -- | -- |
| 55.11 | 0.348 | 3.03 | -0.0296 | 0.0826 | -- | -0.114 | -- | 0.0357 | 8.01 | -- | -- | -- | -- |
| 55.14 | 0.348 | 3.03 | -0.0326 | 0.0824 | -- | -- | -- | 0.0359 | 8.22 | -- | -- | -- | -- |
| 54.87 | 0.345 | 3.03 | -0.0321 | -- | -0.224 | -- | -- | 0.0462 | -- | 51.67 | 6 | -- | -- |
| 54.51 | 0.344 | 3.02 | -- | 0.0856 | -0.233 | -- | -- | 0.0488 | 7.12 | 52 | 6 | -- | -- |
| 55.52 | 0.348 | 3.03 | -0.032 | -- | -- | -- | -- | 0.0368 | -- | -- | -- | -- | -- |
| 55.17 | 0.347 | 3.03 | -- | 0.0823 | -- | -- | -- | 0.0395 | 8.25 | -- | -- | -- | -- |
| 54.89 | 0.345 | 3.03 | -- | -- | -0.224 | -- | -- | 0.0497 | -- | 51.93 | 6 | -- | -- |
| 55.55 | 0.348 | 3.03 | -- | -- | -- | -- | -- | 0.0404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.57 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 2 | 50.51 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 4 | 50.58 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 13 | 50.74 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 23 | 50.74 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 34 | 50.76 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 37 | 50.80 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 41 | 50.95 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 43 | 51.06 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 49 | 51.60 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 50 | 51.60 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 52 | 51.60 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 57 | 51.77 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 121 | 51.90 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 170 | 52.06 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 23 | NA |
| 173 | 52.08 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 176 | 52.08 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 427 | 52.18 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 428 | 52.18 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 429 | 52.19 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 430 | 52.19 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 432 | 52.19 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 433 | 52.19 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 436 | 52.20 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 437 | 52.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 440 | 52.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 444 | 52.20 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 445 | 52.20 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 454 | 52.20 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 455 | 52.20 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 456 | 52.20 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 476 | 52.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 513 | 52.21 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 520 | 52.22 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 536 | 52.23 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 538 | 52.23 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 539 | 52.23 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 543 | 52.23 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 545 | 52.23 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 550 | 52.23 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 551 | 52.23 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 554 | 52.23 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 560 | 52.23 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 561 | 52.23 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 564 | 52.24 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 575 | 52.26 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 597 | 52.29 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 710 | 52.34 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 713 | 52.34 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 719 | 52.35 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 765 | 52.41 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 769 | 52.41 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 777 | 52.44 | humidity | 50.0 | 10 | > th | dose independent | sin | 8 | NA |
| 835 | 52.59 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 855 | 52.70 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 928 | 52.85 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 986 | 52.89 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 3 | 6 |
| 993 | 52.90 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 996 | 52.90 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 19 | 14 |
| 1000 | 52.92 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 24 | 7 |