Os01g0562600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os01g0562600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.68 | 0.582 | 7.02 | -0.0458 | 1.09 | -0.566 | 0.214 | -3.33 | 0.214 | 3.58 | 24.62 | 1377 | -- | -- |
| 158.29 | 0.586 | 6.91 | 0.892 | 1.01 | -0.855 | 0.296 | -- | 0.44 | 3.52 | 25.2 | 1532 | -- | -- |
| 153.81 | 0.578 | 7.02 | -0.0285 | 1.09 | -0.575 | -- | -3.25 | 0.22 | 3.58 | 24.54 | 1377 | -- | -- |
| 157.99 | 0.585 | 6.91 | 0.884 | 1.01 | -0.895 | -- | -- | 0.433 | 3.58 | 25.2 | 1538 | -- | -- |
| 168.07 | 0.604 | 6.92 | 0.579 | -- | -1.57 | -- | -2.06 | 0.507 | -- | 23 | 155 | -- | -- |
| 189.52 | 0.645 | 6.94 | 0.577 | 0.987 | -- | -0.087 | -- | 0.332 | 3.69 | -- | -- | -- | -- |
| 189.54 | 0.645 | 6.94 | 0.578 | 0.987 | -- | -- | -- | 0.332 | 3.69 | -- | -- | -- | -- |
| 167.71 | 0.603 | 6.89 | 0.918 | -- | -1.69 | -- | -- | 0.572 | -- | 23.2 | 154 | -- | -- |
| 173.92 | 0.614 | 6.98 | -- | 1.03 | -0.836 | -- | -- | 0.151 | 3 | 29 | 961 | -- | -- |
| 243.52 | 0.729 | 6.94 | 0.62 | -- | -- | -- | -- | 0.359 | -- | -- | -- | -- | -- |
| 198.36 | 0.659 | 6.95 | -- | 0.998 | -- | -- | -- | 0.268 | 3.69 | -- | -- | -- | -- |
| 189.11 | 0.64 | 6.92 | -- | -- | -1.53 | -- | -- | 0.436 | -- | 23.66 | 156 | -- | -- |
| 253.64 | 0.743 | 6.95 | -- | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 2 | 151.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 20 | 152.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 28 | 152.26 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 40 | 152.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 52 | 152.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 70 | 152.87 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 75 | 152.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 103 | 152.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 164 | 153.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 19 |
| 473 | 153.83 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 491 | 153.88 | radiation | 20 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 611 | 154.16 | temperature | 25 | 720 | > th | dose dependent | sin | 9 | NA |
| 650 | 154.26 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 671 | 154.32 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 897 | 154.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 912 | 154.93 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 23 |