Os01g0558100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase TSI-1 (EC 2.5.1.18) (Glutathione S- transferase 1).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0558100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Glutathione S-transferase TSI-1 (EC 2.5.1.18) (Glutathione S- transferase 1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 264.97 | 0.765 | 9.96 | 3.21 | 2.95 | -2.88 | -0.349 | 0.163 | 0.844 | 15.4 | 16.47 | 1411 | -- | -- |
| 265 | 0.758 | 9.96 | 3.17 | 2.95 | -2.86 | -0.363 | -- | 0.83 | 15.4 | 16.51 | 1407 | -- | -- |
| 265.34 | 0.759 | 9.95 | 3.22 | 2.95 | -2.88 | -- | 0.226 | 0.845 | 15.4 | 16.43 | 1413 | -- | -- |
| 265.39 | 0.759 | 9.96 | 3.16 | 2.95 | -2.9 | -- | -- | 0.831 | 15.4 | 16.3 | 1413 | -- | -- |
| 693.23 | 1.23 | 9.9 | 3.36 | -- | -3.36 | -- | 0.524 | 0.957 | -- | 19.05 | 1164 | -- | -- |
| 436.18 | 0.979 | 10.1 | 2.19 | 3.14 | -- | -0.197 | -- | 0.252 | 15.4 | -- | -- | -- | -- |
| 436.3 | 0.978 | 10.1 | 2.19 | 3.13 | -- | -- | -- | 0.251 | 15.4 | -- | -- | -- | -- |
| 693.2 | 1.23 | 9.94 | 3.23 | -- | -3.31 | -- | -- | 0.896 | -- | 19.25 | 1165 | -- | -- |
| 482.59 | 1.02 | 10.1 | -- | 2.86 | -1.54 | -- | -- | 0.278 | 15.6 | 21.9 | 1175 | -- | -- |
| 990.1 | 1.47 | 10.1 | 2.05 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 562.17 | 1.11 | 10.1 | -- | 3.09 | -- | -- | -- | 0.00778 | 15.4 | -- | -- | -- | -- |
| 915.6 | 1.41 | 10.1 | -- | -- | -2.25 | -- | -- | 0.208 | -- | 24 | 1173 | -- | -- |
| 1101.23 | 1.55 | 10.1 | -- | -- | -- | -- | -- | -0.0593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 258.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 2 | 258.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 6 | 261.18 | temperature | 15 | 720 | > th | dose dependent | sin | 15 | NA |
| 10 | 261.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 11 | 262.08 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 16 | 262.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 18 | 262.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 19 | 262.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 20 | 262.88 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 24 | 262.96 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 49 | 263.55 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 64 | 263.73 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 108 | 264.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 17 |
| 159 | 264.94 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 8 |
| 199 | 265.22 | temperature | 15 | 1440 | > th | dose dependent | sin | 6 | NA |
| 224 | 265.47 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 227 | 265.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 232 | 265.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 20 |
| 257 | 265.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 838 | 268.27 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |