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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0557200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.92 (0.0143) R2 : 0.0164
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0828 (0.03) R2dN8 : 0.0212 R2N8 : 0.0164
σ : 0.269
deviance : 33.12
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.48 0.264 2.91 0.0129 0.0818 0.0377 -0.42 0.78 0.0818 6.12 64.55 3504 -- --
32.01 0.263 2.91 0.0939 0.0918 0.134 -0.251 -- 0.105 5.55 47.99 2606 -- --
31.76 0.262 2.91 0.0189 0.0847 0.0457 -- 0.783 0.087 6.11 61.63 4111 -- --
32.19 0.264 2.91 0.0968 0.0852 0.142 -- -- 0.102 5.51 43.98 2606 -- --
32.13 0.264 2.9 0.0213 -- 0.0524 -- 0.78 0.0902 -- 61 4100 -- --
32.32 0.267 2.91 0.0987 0.0839 -- -0.282 -- 0.0908 6.03 -- -- -- --
32.51 0.267 2.91 0.0964 0.0828 -- -- -- 0.092 6.44 -- -- -- --
32.39 0.265 2.91 0.102 -- 0.15 -- -- 0.1 -- 46.09 1976 -- --
32.43 0.265 2.91 -- 0.0874 0.14 -- -- 0.0934 5.52 48.01 2618 -- --
32.86 0.268 2.91 0.0985 -- -- -- -- 0.0938 -- -- -- -- --
32.75 0.268 2.91 -- 0.0841 -- -- -- 0.0813 6.37 -- -- -- --
32.65 0.266 2.91 -- -- 0.148 -- -- 0.0891 -- 49.01 1983 -- --
33.12 0.269 2.92 -- -- -- -- -- 0.0828 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.88 wind 1.0 30 < th dose independent rect. 2 1
2 29.89 atmosphere 1005.0 30 > th dose dependent rect. 2 1
3 29.90 wind 3.0 30 < th dose dependent rect. 2 1
4 29.91 temperature 20.0 30 > th dose dependent rect. 2 1
9 29.93 temperature 20.0 30 > th dose independent rect. 2 1
10 29.93 atmosphere 1005.0 30 > th dose independent rect. 2 1
14 29.94 temperature 25.0 30 < th dose independent rect. 2 1
15 29.94 humidity 80.0 30 > th dose independent rect. 2 1
20 29.95 temperature 10.0 30 > th dose independent rect. 2 1
23 29.95 humidity 50.0 30 > th dose independent rect. 2 1
26 29.95 atmosphere 995.0 30 > th dose independent rect. 2 1
27 29.95 atmosphere 1010.0 30 < th dose independent rect. 2 1
29 29.95 radiation 1.0 30 < th dose independent rect. 2 1
34 29.95 precipitation 0.1 30 < th dose independent rect. 2 1
35 29.95 temperature 10.0 30 > th dose independent rect. 3 23
36 29.95 humidity 50.0 30 > th dose dependent rect. 2 1
39 29.95 radiation 1.0 30 < th dose dependent rect. 2 1
44 29.95 precipitation 0.1 30 < th dose dependent rect. 2 1
49 29.99 wind 9.0 30 < th dose independent rect. 3 23
50 30.00 wind 9.0 4320 < th dose independent rect. 3 1
51 30.01 atmosphere 1015.0 30 < th dose dependent rect. 2 1
52 30.02 temperature 30.0 30 < th dose dependent rect. 2 1
60 30.16 wind 1.0 30 > th dose independent rect. 2 1
110 30.65 atmosphere 995.0 30 > th dose independent rect. 3 23
112 30.72 wind 7.0 4320 < th dose independent rect. 5 1
116 30.75 precipitation 0.1 30 < th dose independent rect. 3 23
117 30.75 precipitation 0.1 30 < th dose dependent rect. 3 23
121 30.82 wind 3.0 4320 > th dose dependent rect. 3 1
122 30.83 wind 9.0 43200 < th dose independent rect. 5 1
131 30.88 wind 3.0 4320 < th dose dependent rect. 19 1
134 30.91 wind 9.0 4320 > th dose independent rect. 3 1
142 30.91 temperature 15.0 1440 > th dose independent rect. 5 1
168 30.91 wind 9.0 4320 > th dose dependent rect. 3 1
202 30.93 wind 3.0 4320 < th dose dependent rect. 15 6
205 30.94 wind 1.0 4320 > th dose independent rect. 15 3
225 31.01 wind 1.0 4320 < th dose independent rect. 19 1
228 31.01 wind 9.0 4320 < th dose independent rect. 4 6
231 31.01 wind 1.0 4320 < th dose dependent rect. 15 2
235 31.02 wind 1.0 4320 > th dose independent rect. 19 1
237 31.02 wind 5.0 4320 < th dose independent rect. 2 5
239 31.02 wind 5.0 4320 < th dose independent rect. 1 7
240 31.02 wind 9.0 4320 < th dose independent rect. 1 10
245 31.03 wind 1.0 4320 < th dose independent rect. 15 3
253 31.04 wind 5.0 4320 < th dose independent rect. 3 3
261 31.05 wind 5.0 4320 > th dose independent rect. 2 6
266 31.06 wind 1.0 4320 > th dose independent rect. 14 1
267 31.06 wind 1.0 4320 < th dose independent rect. 14 1
269 31.06 humidity 90.0 4320 < th dose independent rect. 11 1
273 31.06 wind 1.0 720 < th dose dependent rect. 16 1
282 31.07 wind 5.0 4320 > th dose independent rect. 3 3
290 31.07 radiation 1.0 14400 < th dose dependent rect. 3 1
296 31.08 temperature 10.0 1440 > th dose independent rect. 3 1
299 31.08 temperature 30.0 1440 < th dose independent rect. 3 1
303 31.08 humidity 50.0 1440 > th dose independent rect. 3 1
312 31.08 atmosphere 995.0 1440 > th dose independent rect. 3 1
313 31.08 radiation 1.0 1440 < th dose independent rect. 3 1
335 31.08 wind 1.0 720 < th dose independent rect. 16 4
337 31.08 wind 1.0 14400 > th dose independent rect. 15 6
340 31.08 temperature 10.0 1440 > th dose independent rect. 4 23
343 31.08 radiation 1.0 1440 < th dose dependent rect. 3 1
373 31.09 wind 1.0 270 < th dose independent rect. 18 2
378 31.09 wind 1.0 270 < th dose dependent rect. 18 2
380 31.09 wind 1.0 720 < th dose dependent rect. 16 3
383 31.09 humidity 90.0 4320 > th dose dependent rect. 10 8
393 31.10 wind 1.0 14400 < th dose independent rect. 15 6
457 31.13 humidity 90.0 4320 > th dose dependent rect. 14 4
469 31.14 wind 9.0 4320 < th dose independent rect. 1 6
571 31.17 humidity 90.0 4320 > th dose dependent rect. 10 14
587 31.18 humidity 90.0 4320 > th dose dependent rect. 16 2
599 31.19 humidity 90.0 90 < th dose independent rect. 2 1
611 31.19 wind 1.0 720 > th dose independent rect. 15 8
613 31.19 humidity 50.0 30 > th dose independent rect. 3 23
622 31.19 radiation 1.0 4320 < th dose dependent rect. 19 4
637 31.20 atmosphere 1005.0 43200 < th dose independent rect. 20 1
645 31.20 humidity 90.0 4320 > th dose independent rect. 10 7
656 31.20 wind 5.0 4320 > th dose dependent rect. 22 11
661 31.21 wind 9.0 4320 < th dose independent rect. 7 1
664 31.21 humidity 90.0 4320 > th dose independent rect. 15 2
672 31.21 atmosphere 1015.0 30 < th dose independent rect. 3 23
688 31.21 humidity 90.0 4320 > th dose dependent rect. 14 10
709 31.22 wind 1.0 1440 < th dose dependent rect. 8 1
714 31.22 temperature 20.0 4320 < th dose dependent rect. 19 1
745 31.23 temperature 15.0 1440 > th dose independent rect. 5 3
753 31.23 wind 9.0 4320 > th dose independent rect. 23 7
764 31.23 wind 9.0 4320 < th dose independent rect. 21 11
769 31.23 humidity 90.0 4320 > th dose dependent sin 20 NA
776 31.23 wind 1.0 1440 < th dose dependent rect. 7 3
784 31.23 wind 9.0 4320 > th dose dependent rect. 23 6
810 31.24 temperature 20.0 4320 < th dose independent rect. 17 1
846 31.24 wind 7.0 4320 < th dose independent rect. 22 8
935 31.25 atmosphere 1005.0 43200 < th dose independent rect. 20 7