Os01g0557100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
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Os01g0557100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181.88 | 0.634 | 8.06 | 0.647 | 2.13 | 1.24 | -0.675 | 0.287 | -0.256 | 11.9 | 25 | 3573 | -- | -- |
| 181.92 | 0.628 | 8.05 | 0.724 | 2.12 | 1.26 | -0.669 | -- | -0.242 | 11.9 | 24.9 | 3620 | -- | -- |
| 183.83 | 0.631 | 8.05 | 0.654 | 2.14 | 1.25 | -- | 0.143 | -0.251 | 11.9 | 25 | 3572 | -- | -- |
| 183.83 | 0.631 | 8.05 | 0.697 | 2.13 | 1.26 | -- | -- | -0.237 | 11.9 | 24.99 | 3572 | -- | -- |
| 435.95 | 0.972 | 8.06 | 0.817 | -- | 1.99 | -- | 0.143 | -0.0518 | -- | 25.1 | 2395 | -- | -- |
| 220.59 | 0.696 | 8.11 | 0.261 | 2.27 | -- | -0.629 | -- | -0.526 | 11.8 | -- | -- | -- | -- |
| 222.31 | 0.698 | 8.11 | 0.236 | 2.27 | -- | -- | -- | -0.528 | 11.8 | -- | -- | -- | -- |
| 383.81 | 0.912 | 7.99 | 0.794 | -- | 2.03 | -- | -- | 0.166 | -- | 25.1 | 904 | -- | -- |
| 195.33 | 0.651 | 8.07 | -- | 2.13 | 1.04 | -- | -- | -0.34 | 11.8 | 24.81 | 3571 | -- | -- |
| 545.95 | 1.09 | 8.16 | 0.169 | -- | -- | -- | -- | -0.557 | -- | -- | -- | -- | -- |
| 223.77 | 0.7 | 8.11 | -- | 2.26 | -- | -- | -- | -0.555 | 11.8 | -- | -- | -- | -- |
| 399.3 | 0.931 | 8.03 | -- | -- | 1.88 | -- | -- | 0.032 | -- | 25.13 | 898 | -- | -- |
| 546.7 | 1.09 | 8.16 | -- | -- | -- | -- | -- | -0.576 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.92 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 2 | 170.93 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 10 | 171.23 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 31 | 174.30 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 32 | 174.32 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 49 | 174.55 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 14 |
| 63 | 176.53 | radiation | 30 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 80 | 176.91 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 115 | 178.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 132 | 178.69 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 196 | 179.73 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 4 |
| 220 | 179.99 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 13 |
| 326 | 182.24 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 342 | 182.41 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 356 | 182.42 | temperature | 15 | 10 | > th | dose dependent | rect. | 19 | 10 |
| 359 | 182.59 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 368 | 183.10 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 389 | 183.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 390 | 183.23 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 391 | 183.24 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 412 | 183.45 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 424 | 183.60 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 440 | 183.81 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 441 | 183.83 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 442 | 183.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 443 | 183.84 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 445 | 183.87 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 449 | 183.90 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 451 | 183.94 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 462 | 184.12 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 465 | 184.14 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 471 | 184.19 | temperature | 10 | 4320 | > th | dose dependent | rect. | 10 | 18 |
| 484 | 184.27 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 488 | 184.28 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 502 | 184.33 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 505 | 184.34 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 508 | 184.36 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 570 | 184.46 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 577 | 184.47 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 629 | 184.51 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 642 | 184.54 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 648 | 184.55 | temperature | 10 | 4320 | > th | dose dependent | sin | 16 | NA |
| 687 | 184.61 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 707 | 184.63 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 20 |
| 801 | 184.74 | radiation | 10 | 4320 | < th | dose independent | sin | 14 | NA |
| 840 | 184.79 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 872 | 184.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 23 |
| 893 | 184.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 951 | 184.89 | temperature | 30 | 4320 | < th | dose dependent | sin | 15 | NA |
| 958 | 184.90 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 1 |