Os01g0551800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0551800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.44 | 0.306 | 3.06 | 0.0227 | 0.0819 | 8.23 | 0.422 | -35.4 | -0.0458 | 11 | 90.04 | 12 | 2.96 | 2 |
| 79.65 | 0.416 | 3.04 | 0.0217 | 0.135 | 3.27 | -0.0472 | -- | -0.06 | 8 | 89.76 | 184 | 2.28 | 0.0136 |
| 43.06 | 0.308 | 3.06 | 0.039 | 0.0925 | 8.46 | -- | -36.6 | -0.0475 | 9.11 | 90 | 13 | 2.97 | 2 |
| 79.27 | 0.415 | 3.04 | 0.0584 | 0.0984 | 3.08 | -- | -- | -0.0524 | 9.01 | 90.23 | 178 | 2.28 | 0.0129 |
| 43.55 | 0.309 | 3.06 | 0.0388 | -- | 8.49 | -- | -36.7 | -0.047 | -- | 90 | 13 | 2.97 | 2 |
| 94.94 | 0.457 | 3.06 | 0.0131 | 0.112 | -- | -1.03 | -- | -0.0583 | 3.88 | -- | -- | -- | -- |
| 97.39 | 0.462 | 3.05 | 0.0279 | 0.155 | -- | -- | -- | -0.0528 | 6.68 | -- | -- | -- | -- |
| 79.76 | 0.416 | 3.06 | 0.0652 | -- | 3.12 | -- | -- | -0.065 | -- | 90.26 | 180 | 2.28 | 0.000674 |
| 79.32 | 0.415 | 3.05 | -- | 0.0961 | 3.1 | -- | -- | -0.0721 | 9.67 | 90.25 | 169 | 2.27 | 0.0139 |
| 98.65 | 0.464 | 3.05 | 0.0315 | -- | -- | -- | -- | -0.0497 | -- | -- | -- | -- | -- |
| 97.41 | 0.462 | 3.05 | -- | 0.155 | -- | -- | -- | -0.0559 | 6.67 | -- | -- | -- | -- |
| 79.87 | 0.416 | 3.06 | -- | -- | 3.1 | -- | -- | -0.0723 | -- | 90.26 | 181 | 2.28 | 0.00756 |
| 98.67 | 0.464 | 3.05 | -- | -- | -- | -- | -- | -0.0532 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.67 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 5 | 43.75 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 12 | 43.82 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 50 | 55.73 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 57 | 65.92 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 74 | 70.51 | temperature | 20.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 149 | 75.01 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 163 | 75.95 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 294 | 81.46 | wind | 1.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 306 | 81.78 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 332 | 82.66 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 348 | 82.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 389 | 83.11 | wind | 3.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 391 | 83.11 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 472 | 84.24 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 1 |
| 473 | 84.24 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 1 |
| 477 | 84.27 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 2 |
| 478 | 84.27 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 499 | 84.50 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 503 | 84.53 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 506 | 84.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 508 | 84.54 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 1 |
| 509 | 84.54 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 512 | 84.54 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 513 | 84.54 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 1 |
| 515 | 84.54 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 1 |
| 521 | 84.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 23 |
| 522 | 84.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 1 |
| 529 | 84.55 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 531 | 84.55 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 532 | 84.55 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 535 | 84.55 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 536 | 84.55 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 538 | 84.55 | radiation | 1.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 543 | 84.55 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 22 |
| 560 | 84.66 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 23 |
| 562 | 84.66 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 564 | 84.68 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 22 |
| 566 | 84.69 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 23 |
| 590 | 84.72 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 22 |
| 591 | 84.72 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 22 |
| 598 | 84.78 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 599 | 84.78 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 602 | 84.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 606 | 84.78 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 615 | 84.78 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 616 | 84.78 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 617 | 84.78 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 626 | 84.78 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 637 | 84.82 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 22 |
| 673 | 84.88 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 2 |