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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0549100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0165) R2 : 0.0303
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.131 (0.0348) R2dN8 : 0.0391 R2N8 : 0.0303
σ : 0.311
deviance : 44.51
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.78 0.307 2.93 0.218 0.0953 -0.202 -0.0242 2 0.177 5.55 26.2 370 -- --
43.41 0.309 2.96 -0.00959 0.139 0.0791 -0.239 -- 0.13 5.28 30 564 -- --
42.78 0.305 2.93 0.227 0.0952 -0.209 -- 2.09 0.178 5.52 26.3 389 -- --
43.55 0.309 2.96 -0.0108 0.139 0.0959 -- -- 0.131 5.23 30 564 -- --
43.06 0.306 2.93 0.279 -- -0.315 -- 2.4 0.19 -- 26.3 427 -- --
43.47 0.309 2.96 -0.00504 0.131 -- -0.259 -- 0.127 5.37 -- -- -- --
43.63 0.309 2.96 -0.00557 0.129 -- -- -- 0.128 5.37 -- -- -- --
44.28 0.31 2.96 0.002 -- -0.0794 -- -- 0.139 -- 26.09 570 -- --
43.56 0.309 2.96 -- 0.139 0.0941 -- -- 0.132 5.24 30 564 -- --
44.51 0.312 2.96 -0.00118 -- -- -- -- 0.131 -- -- -- -- --
43.63 0.309 2.96 -- 0.129 -- -- -- 0.129 5.38 -- -- -- --
44.25 0.31 2.96 -- -- -0.0868 -- -- 0.141 -- 25.7 502 -- --
44.51 0.311 2.96 -- -- -- -- -- 0.131 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.28 temperature 25.0 30 > th dose independent rect. 22 1
2 39.32 wind 9.0 1440 < th dose independent rect. 23 1
3 39.32 temperature 10.0 1440 > th dose independent rect. 23 1
6 39.32 temperature 30.0 1440 < th dose independent rect. 23 1
10 39.32 humidity 50.0 1440 > th dose independent rect. 23 1
20 39.32 atmosphere 995.0 1440 > th dose independent rect. 23 1
21 39.32 radiation 1.0 1440 < th dose independent rect. 23 1
41 39.32 temperature 10.0 1440 > th dose independent rect. 24 23
44 39.32 radiation 1.0 1440 < th dose dependent rect. 23 1
49 39.33 temperature 20.0 30 > th dose dependent rect. 22 1
50 39.36 humidity 90.0 30 < th dose independent rect. 22 1
53 39.38 atmosphere 1005.0 30 > th dose dependent rect. 22 1
55 39.39 atmosphere 1005.0 30 > th dose independent rect. 22 1
59 39.41 wind 3.0 30 < th dose independent rect. 22 1
63 39.45 precipitation 0.1 30 < th dose independent rect. 22 1
65 39.45 precipitation 0.1 30 < th dose dependent rect. 22 1
66 39.47 wind 7.0 30 < th dose dependent rect. 22 1
68 39.47 humidity 90.0 30 < th dose dependent rect. 22 1
72 39.48 temperature 10.0 30 > th dose independent rect. 22 1
74 39.48 temperature 30.0 30 < th dose independent rect. 22 1
75 39.48 humidity 50.0 30 > th dose independent rect. 22 1
79 39.48 atmosphere 1010.0 30 < th dose independent rect. 22 1
81 39.48 radiation 1.0 30 < th dose independent rect. 22 1
86 39.48 temperature 10.0 30 > th dose independent rect. 23 23
87 39.48 radiation 1.0 30 < th dose dependent rect. 22 1
94 39.50 wind 1.0 30 > th dose independent rect. 22 1
95 39.52 humidity 50.0 30 > th dose dependent rect. 22 1
99 39.62 wind 1.0 30 > th dose dependent rect. 22 1
101 39.69 atmosphere 1015.0 30 < th dose dependent rect. 22 1
107 39.90 temperature 30.0 30 < th dose dependent rect. 22 1
121 40.22 wind 9.0 30 < th dose independent rect. 23 23
164 41.26 temperature 10.0 720 > th dose independent rect. 15 8
165 41.26 temperature 10.0 720 > th dose independent rect. 23 16
166 41.36 temperature 10.0 720 > th dose independent rect. 3 8
167 41.36 atmosphere 995.0 720 > th dose independent rect. 3 8
168 41.36 temperature 10.0 720 > th dose independent rect. 11 16
169 41.42 atmosphere 995.0 720 > th dose independent rect. 23 16
171 41.46 wind 9.0 720 < th dose independent rect. 3 8
173 41.50 humidity 50.0 720 > th dose independent rect. 3 8
175 41.57 temperature 10.0 720 > th dose independent rect. 7 8
176 41.57 atmosphere 1015.0 720 < th dose independent rect. 7 8
177 41.57 temperature 10.0 720 > th dose independent rect. 15 16
178 41.59 humidity 90.0 90 < th dose independent rect. 2 5
179 41.59 wind 9.0 720 < th dose independent rect. 19 8
183 41.61 atmosphere 1005.0 30 > th dose dependent rect. 2 6
184 41.62 temperature 10.0 720 > th dose independent rect. 19 8
185 41.62 temperature 30.0 720 < th dose independent rect. 19 8
186 41.62 humidity 50.0 720 > th dose independent rect. 19 8
187 41.62 atmosphere 995.0 720 > th dose independent rect. 7 8
188 41.62 atmosphere 995.0 720 > th dose independent rect. 19 8
189 41.62 radiation 1.0 720 < th dose independent rect. 19 8
194 41.62 temperature 10.0 720 > th dose independent rect. 3 16
195 41.62 radiation 1.0 720 < th dose dependent rect. 19 8
200 41.64 precipitation 0.1 720 < th dose independent rect. 19 8
202 41.64 precipitation 0.1 720 < th dose dependent rect. 19 8
204 41.65 precipitation 0.1 720 < th dose independent rect. 7 8
205 41.65 precipitation 0.1 720 < th dose independent rect. 15 8
206 41.65 precipitation 0.1 720 < th dose dependent rect. 7 8
207 41.65 precipitation 0.1 720 < th dose dependent rect. 15 8
208 41.68 temperature 20.0 30 > th dose dependent rect. 2 1
209 41.68 atmosphere 1005.0 30 > th dose dependent rect. 2 1
210 41.70 temperature 20.0 30 > th dose independent rect. 2 1
211 41.70 radiation 10.0 43200 < th dose dependent rect. 3 1
212 41.71 wind 9.0 1440 < th dose independent rect. 3 1
213 41.71 temperature 10.0 1440 > th dose independent rect. 3 1
216 41.71 temperature 30.0 1440 < th dose independent rect. 3 1
220 41.71 humidity 50.0 1440 > th dose independent rect. 3 1
229 41.71 atmosphere 1005.0 30 > th dose independent rect. 2 1
230 41.71 atmosphere 995.0 1440 > th dose independent rect. 3 1
231 41.71 radiation 1.0 1440 < th dose independent rect. 3 1
251 41.71 temperature 10.0 1440 > th dose independent rect. 4 23
254 41.71 wind 3.0 30 < th dose dependent rect. 2 1
257 41.71 radiation 1.0 1440 < th dose dependent rect. 3 1
278 41.73 wind 3.0 30 < th dose independent rect. 2 1
279 41.73 temperature 25.0 30 < th dose independent rect. 2 1
280 41.73 humidity 80.0 30 > th dose independent rect. 2 1
287 41.74 temperature 10.0 30 > th dose independent rect. 2 1
290 41.74 humidity 50.0 30 > th dose independent rect. 2 1
294 41.74 atmosphere 1010.0 30 < th dose independent rect. 2 1
296 41.74 radiation 1.0 30 < th dose independent rect. 2 1
301 41.74 precipitation 0.1 30 < th dose independent rect. 2 1
302 41.74 temperature 10.0 30 > th dose independent rect. 3 23
303 41.74 humidity 50.0 30 > th dose dependent rect. 2 1
304 41.74 radiation 1.0 30 < th dose dependent rect. 2 1
309 41.74 precipitation 0.1 30 < th dose dependent rect. 2 1
316 41.77 radiation 40.0 720 < th dose independent rect. 15 8
317 41.78 atmosphere 1015.0 720 < th dose independent rect. 3 8
320 41.80 precipitation 0.1 720 < th dose independent rect. 15 16
321 41.80 atmosphere 1015.0 30 < th dose dependent rect. 2 1
323 41.80 precipitation 0.1 720 < th dose dependent rect. 15 16
324 41.81 atmosphere 995.0 720 > th dose independent rect. 3 16
327 41.82 wind 9.0 30 < th dose independent rect. 3 23
328 41.83 temperature 30.0 30 < th dose dependent rect. 2 1
330 41.84 atmosphere 995.0 720 > th dose independent rect. 15 16
332 41.85 temperature 25.0 90 > th dose dependent rect. 1 5
333 41.86 wind 1.0 30 > th dose independent rect. 2 1
345 41.91 atmosphere 1015.0 720 < th dose independent rect. 3 16
346 41.91 precipitation 0.1 720 < th dose independent rect. 11 16
347 41.91 precipitation 0.1 720 < th dose dependent rect. 11 16
349 41.92 radiation 40.0 720 < th dose independent rect. 15 16
350 41.92 precipitation 0.1 30 < th dose independent rect. 3 23
351 41.92 precipitation 0.1 30 < th dose dependent rect. 3 23
355 41.93 atmosphere 1000.0 30 > th dose independent rect. 3 23
369 41.97 temperature 25.0 90 > th dose dependent rect. 1 3
371 41.98 wind 1.0 720 > th dose independent rect. 15 8
374 41.99 atmosphere 995.0 720 > th dose independent rect. 15 8
379 42.00 temperature 25.0 90 > th dose independent rect. 1 6
387 42.02 temperature 25.0 720 > th dose independent rect. 1 1
416 42.06 wind 9.0 720 < th dose independent rect. 15 16
419 42.07 precipitation 0.1 720 < th dose independent rect. 3 8
420 42.07 humidity 50.0 720 > th dose independent rect. 23 16
421 42.07 atmosphere 995.0 720 > th dose independent rect. 11 16
422 42.07 precipitation 0.1 720 < th dose dependent rect. 3 8
424 42.08 precipitation 0.1 720 < th dose independent rect. 23 16
426 42.08 precipitation 0.1 720 < th dose dependent rect. 23 16
433 42.10 wind 9.0 720 < th dose independent rect. 15 8
436 42.11 humidity 50.0 720 > th dose independent rect. 7 8
437 42.11 atmosphere 995.0 30 > th dose independent rect. 23 23
438 42.12 wind 9.0 720 < th dose independent rect. 7 8
439 42.12 wind 9.0 720 < th dose independent rect. 23 16
449 42.18 temperature 25.0 1440 < th dose independent rect. 1 1
456 42.21 wind 1.0 10 > th dose independent rect. 8 22
457 42.21 humidity 50.0 30 > th dose independent rect. 3 23
459 42.22 precipitation 0.1 720 < th dose independent rect. 3 16
461 42.22 precipitation 0.1 720 < th dose dependent rect. 3 16
468 42.27 atmosphere 995.0 4320 > th dose independent rect. 7 1
474 42.28 wind 1.0 30 > th dose independent rect. 6 1
475 42.28 wind 9.0 1440 < th dose independent rect. 7 1
476 42.28 temperature 10.0 1440 > th dose independent rect. 7 1
480 42.28 temperature 30.0 1440 < th dose independent rect. 7 1
484 42.28 humidity 50.0 1440 > th dose independent rect. 7 1
489 42.28 humidity 90.0 30 < th dose independent rect. 6 1
490 42.28 atmosphere 1000.0 30 > th dose independent rect. 6 1
492 42.28 atmosphere 1015.0 1440 < th dose independent rect. 7 1
493 42.28 temperature 10.0 1440 > th dose independent rect. 8 23
497 42.29 wind 3.0 30 < th dose independent rect. 6 1
501 42.29 temperature 10.0 30 > th dose independent rect. 6 1
503 42.29 temperature 30.0 30 < th dose independent rect. 6 1
504 42.29 humidity 50.0 30 > th dose independent rect. 6 1
510 42.29 atmosphere 1015.0 30 < th dose independent rect. 6 1
511 42.29 radiation 20.0 30 < th dose independent rect. 6 1
514 42.29 radiation 40.0 1440 < th dose independent rect. 7 1
515 42.29 precipitation 0.1 30 < th dose independent rect. 6 1
516 42.29 temperature 10.0 30 > th dose independent rect. 7 23
517 42.29 temperature 10.0 30 > th dose dependent rect. 6 1
518 42.29 atmosphere 995.0 30 > th dose dependent rect. 6 1
519 42.29 precipitation 0.1 30 < th dose dependent rect. 6 1
524 42.30 radiation 1.0 30 > th dose independent rect. 6 1
525 42.30 wind 7.0 30 < th dose dependent rect. 6 1
528 42.30 humidity 50.0 30 > th dose dependent rect. 6 1
531 42.30 radiation 30.0 30 < th dose dependent rect. 6 1
533 42.30 humidity 90.0 90 < th dose dependent rect. 2 5
535 42.31 wind 9.0 30 < th dose independent rect. 7 23
538 42.31 humidity 90.0 10 < th dose dependent rect. 6 1
539 42.31 radiation 1.0 30 > th dose dependent rect. 6 1
560 42.34 wind 1.0 10 > th dose independent rect. 23 7
562 42.34 temperature 25.0 720 > th dose dependent rect. 1 1
565 42.34 temperature 30.0 30 < th dose dependent rect. 6 1
567 42.34 humidity 80.0 4320 < th dose dependent rect. 1 1
576 42.35 atmosphere 1015.0 30 < th dose dependent rect. 6 1
612 42.37 wind 1.0 30 > th dose dependent rect. 6 1
664 42.42 humidity 90.0 90 < th dose independent rect. 2 1
670 42.42 atmosphere 995.0 90 > th dose independent rect. 7 23
673 42.42 temperature 25.0 720 > th dose dependent rect. 7 3
677 42.43 radiation 30.0 1440 < th dose independent rect. 24 7
683 42.44 temperature 25.0 720 < th dose independent rect. 22 4
684 42.44 temperature 25.0 720 < th dose independent rect. 22 6
685 42.44 atmosphere 1005.0 30 > th dose independent rect. 2 6
702 42.45 temperature 10.0 30 > th dose dependent rect. 23 3
704 42.45 wind 5.0 30 < th dose dependent rect. 2 6
712 42.46 precipitation 0.1 30 < th dose independent rect. 6 17
718 42.46 precipitation 0.1 30 < th dose dependent rect. 6 17
724 42.47 temperature 10.0 1440 > th dose independent rect. 24 7
727 42.47 temperature 30.0 1440 < th dose independent rect. 24 7
731 42.47 humidity 50.0 1440 > th dose independent rect. 24 7
736 42.47 atmosphere 995.0 1440 > th dose independent rect. 24 7
741 42.47 temperature 10.0 1440 > th dose independent rect. 7 17
752 42.48 radiation 20.0 30 < th dose independent rect. 6 17
772 42.49 temperature 25.0 720 > th dose independent rect. 20 7
774 42.49 precipitation 0.1 30 < th dose independent rect. 23 23
789 42.49 precipitation 0.1 30 < th dose dependent rect. 23 23
795 42.50 wind 5.0 30 < th dose independent rect. 2 6
797 42.50 wind 9.0 30 < th dose independent rect. 23 7
798 42.50 temperature 10.0 30 > th dose independent rect. 23 7
800 42.50 temperature 30.0 30 < th dose independent rect. 23 7
801 42.50 humidity 50.0 30 > th dose independent rect. 23 7
804 42.50 atmosphere 995.0 30 > th dose independent rect. 23 7
805 42.50 radiation 20.0 30 < th dose independent rect. 23 7
808 42.50 temperature 10.0 30 > th dose independent rect. 6 17
810 42.50 atmosphere 1015.0 30 < th dose independent rect. 6 17
827 42.51 atmosphere 1000.0 30 > th dose independent rect. 8 18
828 42.51 precipitation 0.1 90 < th dose independent rect. 7 23
836 42.51 precipitation 0.1 90 < th dose dependent rect. 7 23
862 42.53 temperature 25.0 720 > th dose independent rect. 20 10
863 42.53 wind 9.0 720 < th dose independent rect. 3 16
876 42.53 radiation 40.0 30 < th dose dependent rect. 23 7
883 42.54 precipitation 0.1 30 < th dose independent rect. 23 7
886 42.54 radiation 40.0 90 < th dose independent rect. 11 12
888 42.54 wind 9.0 30 < th dose independent rect. 8 18
889 42.54 humidity 50.0 90 > th dose independent rect. 7 23
895 42.54 precipitation 0.1 30 < th dose dependent rect. 23 7
901 42.55 wind 9.0 4320 < th dose independent rect. 3 6
903 42.55 wind 1.0 30 > th dose independent rect. 6 17
931 42.56 wind 9.0 30 < th dose independent rect. 6 17
935 42.56 radiation 40.0 90 < th dose independent rect. 1 22
942 42.57 temperature 25.0 720 > th dose independent rect. 7 2
944 42.57 precipitation 0.1 30 < th dose independent rect. 2 6
948 42.57 humidity 50.0 30 > th dose independent rect. 8 18
961 42.57 precipitation 0.1 30 < th dose dependent rect. 2 6
971 42.58 temperature 10.0 1440 > th dose independent rect. 3 6
974 42.58 humidity 50.0 1440 > th dose independent rect. 3 6
976 42.58 atmosphere 995.0 1440 > th dose independent rect. 3 6
980 42.58 temperature 10.0 1440 > th dose independent rect. 9 18