Os01g0547500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0547500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.38 | 0.424 | 6.77 | -0.667 | 0.56 | -0.583 | 1.2 | -0.111 | 0.0874 | 10 | 7.012e-05 | 28 | -- | -- |
| 81.39 | 0.42 | 6.77 | -0.672 | 0.558 | -0.584 | 1.31 | -- | 0.0848 | 10 | 0.0007137 | 27 | -- | -- |
| 82.55 | 0.423 | 6.77 | -0.555 | 0.585 | -0.571 | -- | -0.875 | 0.0844 | 9.91 | 0.04877 | 44 | -- | -- |
| 87.83 | 0.436 | 6.77 | -0.619 | 0.575 | -0.59 | -- | -- | 0.0849 | 9.84 | 0.04024 | 44 | -- | -- |
| 88.33 | 0.44 | 6.79 | -0.597 | -- | -0.91 | -- | -0.874 | 0.0868 | -- | 1.03 | 16 | -- | -- |
| 88.66 | 0.441 | 6.76 | -0.6 | 1.21 | -- | 1.23 | -- | 0.0972 | 11 | -- | -- | -- | -- |
| 95.05 | 0.457 | 6.76 | -0.549 | 1.2 | -- | -- | -- | 0.102 | 11 | -- | -- | -- | -- |
| 93.25 | 0.452 | 6.79 | -0.612 | -- | -0.915 | -- | -- | 0.0814 | -- | 1.03 | 16 | -- | -- |
| 97.95 | 0.461 | 6.76 | -- | 0.569 | -0.587 | -- | -- | 0.148 | 9.87 | 0.3777 | 51 | -- | -- |
| 184.83 | 0.635 | 6.79 | -0.577 | -- | -- | -- | -- | 0.0923 | -- | -- | -- | -- | -- |
| 103.01 | 0.475 | 6.74 | -- | 1.21 | -- | -- | -- | 0.163 | 11.1 | -- | -- | -- | -- |
| 103.12 | 0.475 | 6.77 | -- | -- | -0.909 | -- | -- | 0.149 | -- | 1.03 | 16 | -- | -- |
| 193.61 | 0.649 | 6.77 | -- | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.94 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 3 | 75.22 | wind | 5.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 4 | 75.67 | radiation | 1.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 9 | 75.96 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 10 | 76.04 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 17 | 76.67 | wind | 5.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 19 | 76.74 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 21 | 76.79 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 22 | 76.81 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 25 | 76.86 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 27 | 76.90 | radiation | 1.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 29 | 76.96 | radiation | 10.0 | 90 | < th | dose independent | rect. | 4 | 6 |
| 34 | 77.02 | radiation | 1.0 | 10 | < th | dose independent | sin | 11 | NA |
| 35 | 77.05 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 36 | 77.06 | wind | 7.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 38 | 77.09 | radiation | 1.0 | 10 | > th | dose independent | sin | 11 | NA |
| 39 | 77.10 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 43 | 77.14 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 55 | 77.18 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 61 | 77.25 | wind | 3.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 67 | 77.32 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 3 |
| 68 | 77.32 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 74 | 77.37 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 77 | 77.39 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 80 | 77.40 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 82 | 77.40 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 83 | 77.40 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 85 | 77.40 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 86 | 77.40 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 89 | 77.40 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 94 | 77.48 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 102 | 77.51 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 118 | 77.55 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 120 | 77.59 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 127 | 77.67 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 135 | 77.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 146 | 77.80 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 147 | 77.83 | wind | 5.0 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 159 | 77.92 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 170 | 77.96 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 182 | 78.07 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 6 |
| 189 | 78.11 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 191 | 78.12 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 15 |
| 192 | 78.12 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 196 | 78.15 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 199 | 78.16 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 2 |
| 200 | 78.16 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 204 | 78.17 | temperature | 25.0 | 10 | > th | dose independent | rect. | 13 | 18 |
| 210 | 78.19 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 219 | 78.25 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 221 | 78.25 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 222 | 78.25 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 225 | 78.25 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 226 | 78.25 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 230 | 78.25 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 234 | 78.28 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 239 | 78.30 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 240 | 78.30 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 18 |
| 267 | 78.44 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 289 | 78.51 | temperature | 25.0 | 90 | < th | dose independent | rect. | 10 | 18 |
| 295 | 78.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 307 | 78.58 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 312 | 78.59 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 316 | 78.60 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 22 |
| 323 | 78.62 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 344 | 78.65 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 21 |
| 348 | 78.65 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 376 | 78.74 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 18 | 13 |
| 380 | 78.76 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 382 | 78.76 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 396 | 78.80 | temperature | 25.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 410 | 78.86 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 423 | 78.88 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 16 |
| 427 | 78.90 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 9 |
| 431 | 78.90 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 432 | 78.90 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 459 | 78.96 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 460 | 78.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 463 | 78.96 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 467 | 78.96 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 472 | 78.96 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 473 | 78.96 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 476 | 78.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 480 | 78.96 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 486 | 78.97 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 487 | 78.97 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 488 | 78.97 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 490 | 78.97 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 491 | 78.97 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 497 | 78.97 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 498 | 78.97 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 501 | 78.97 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 527 | 79.01 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 535 | 79.02 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 573 | 79.06 | temperature | 25.0 | 10 | < th | dose independent | rect. | 10 | 19 |
| 579 | 79.07 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 585 | 79.08 | wind | 9.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 605 | 79.10 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 633 | 79.17 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 15 | 13 |
| 654 | 79.21 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 17 | 14 |
| 691 | 79.25 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 715 | 79.29 | temperature | 25.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 717 | 79.29 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 743 | 79.31 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 759 | 79.34 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 22 |
| 764 | 79.34 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 22 |
| 783 | 79.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 798 | 79.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 802 | 79.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 11 |
| 804 | 79.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 821 | 79.44 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 824 | 79.44 | temperature | 25.0 | 10 | < th | dose independent | rect. | 6 | 23 |
| 916 | 79.55 | wind | 1.0 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 978 | 79.65 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 985 | 79.66 | radiation | 20.0 | 10 | < th | dose independent | rect. | 17 | 15 |