Os01g0546600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0546600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.5 | 0.543 | 11.7 | 0.492 | 0.137 | -1.6 | 0.667 | -0.918 | -0.159 | 5.26 | 21.7 | 2232 | -- | -- |
| 134.89 | 0.541 | 11.6 | 0.657 | 0.144 | -1.48 | 0.741 | -- | -0.0907 | 5.27 | 22 | 2196 | -- | -- |
| 134.4 | 0.54 | 11.7 | 0.491 | 0.153 | -1.62 | -- | -0.945 | -0.16 | 3.73 | 21.72 | 2243 | -- | -- |
| 136 | 0.543 | 11.6 | 0.667 | 0.15 | -1.5 | -- | -- | -0.0883 | 3.91 | 22.02 | 2204 | -- | -- |
| 135.13 | 0.541 | 11.7 | 0.361 | -- | -1.51 | -- | -0.917 | -0.164 | -- | 22.02 | 2084 | -- | -- |
| 209.94 | 0.679 | 11.7 | 0.0137 | 0.158 | -- | 0.92 | -- | -0.593 | 6.6 | -- | -- | -- | -- |
| 212.05 | 0.682 | 11.7 | 0.0282 | 0.162 | -- | -- | -- | -0.596 | 7.05 | -- | -- | -- | -- |
| 137.06 | 0.545 | 11.6 | 0.659 | -- | -1.49 | -- | -- | -0.0914 | -- | 22.09 | 2100 | -- | -- |
| 144.77 | 0.56 | 11.6 | -- | 0.168 | -1.27 | -- | -- | -0.191 | 3.79 | 22.31 | 2219 | -- | -- |
| 213.43 | 0.683 | 11.7 | 0.0314 | -- | -- | -- | -- | -0.593 | -- | -- | -- | -- | -- |
| 212.07 | 0.681 | 11.7 | -- | 0.163 | -- | -- | -- | -0.599 | 7.04 | -- | -- | -- | -- |
| 145.97 | 0.563 | 11.6 | -- | -- | -1.27 | -- | -- | -0.197 | -- | 22.34 | 2073 | -- | -- |
| 213.46 | 0.682 | 11.7 | -- | -- | -- | -- | -- | -0.596 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 9 | 137.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 36 | 137.90 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 50 | 138.21 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 70 | 138.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 71 | 138.72 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 72 | 138.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 289 | 141.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 290 | 141.21 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 621 | 142.88 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 669 | 143.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 693 | 143.20 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 722 | 143.33 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 991 | 144.48 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 8 |