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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0545100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.27 (0.0209) R2 : 0.342
β1 : -0.328 (0.0815) R2dD : 0.0285 R2D : -0.0314
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.304 (0.212) R2dE : 0.00701 R2E : -0.0761
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -22.2 (1.97) R2dD*E : 0.451 R2D*E : 0.307
γ1 : -0.0297 (0.0452) R2dN8 : 0.000885 R2N8 : -0.00846
σ : 0.386
deviance : 68.03
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 20.49
memory length : 27
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.02
open length of G : 0.972

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.8 0.381 3.27 -0.326 0.199 -0.322 -0.133 -22.2 -0.0307 8.06 20.45 28 2.04 0.954
84.68 0.432 3.3 0.0273 0.2 1.44 -0.172 -- -0.0342 7.91 17.49 2 2.92 0.637
65.86 0.381 3.27 -0.33 0.199 -0.321 -- -22.2 -0.0307 8.11 20.49 27 2.02 0.972
84.76 0.432 3.3 0.0231 0.199 1.45 -- -- -0.0343 8.1 17.6 4 2.9 0.638
68.03 0.386 3.27 -0.328 -- -0.304 -- -22.2 -0.0297 -- 20.49 27 2.02 0.972
99.43 0.467 3.28 0.0257 0.245 -- -0.388 -- 0.0735 6.3 -- -- -- --
99.78 0.468 3.27 0.0217 0.244 -- -- -- 0.0751 6.59 -- -- -- --
86.94 0.436 3.31 0.0248 -- 1.47 -- -- -0.0333 -- 17.6 4 2.9 0.638
84.78 0.431 3.3 -- 0.199 1.45 -- -- -0.0369 8.09 20.15 5 2.89 0.641
102.88 0.474 3.28 0.0276 -- -- -- -- 0.0801 -- -- -- -- --
99.79 0.467 3.28 -- 0.244 -- -- -- 0.0727 6.58 -- -- -- --
86.95 0.436 3.31 -- -- 1.47 -- -- -0.036 -- 17.6 4 2.9 0.638
102.9 0.473 3.28 -- -- -- -- -- 0.077 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.47 temperature 20.0 30 > th dose dependent rect. 2 1
2 66.58 atmosphere 1005.0 30 > th dose dependent rect. 2 1
3 66.71 temperature 20.0 30 > th dose independent rect. 2 1
4 66.72 atmosphere 1005.0 30 > th dose independent rect. 2 1
10 67.00 wind 3.0 30 < th dose dependent rect. 2 1
12 67.09 wind 3.0 30 < th dose independent rect. 2 1
15 67.25 humidity 80.0 30 > th dose independent rect. 2 1
18 67.36 temperature 25.0 30 < th dose independent rect. 2 1
19 67.36 humidity 50.0 30 > th dose dependent rect. 2 1
22 67.37 temperature 10.0 30 > th dose independent rect. 2 1
25 67.37 humidity 50.0 30 > th dose independent rect. 2 1
29 67.37 atmosphere 1010.0 30 < th dose independent rect. 2 1
31 67.37 radiation 1.0 30 < th dose independent rect. 2 1
36 67.37 precipitation 0.1 30 < th dose independent rect. 2 1
37 67.37 temperature 10.0 30 > th dose independent rect. 3 23
38 67.37 radiation 1.0 30 < th dose dependent rect. 2 1
43 67.37 precipitation 0.1 30 < th dose dependent rect. 2 1
48 68.60 atmosphere 1015.0 30 < th dose dependent rect. 2 1
50 69.04 temperature 30.0 30 < th dose dependent rect. 2 1
52 69.81 wind 1.0 30 > th dose independent rect. 2 1
63 70.97 radiation 10.0 43200 < th dose dependent rect. 3 1
65 71.10 radiation 1.0 4320 < th dose dependent rect. 3 1
76 71.24 wind 9.0 1440 < th dose independent rect. 3 1
77 71.24 temperature 10.0 1440 > th dose independent rect. 3 1
80 71.24 temperature 30.0 1440 < th dose independent rect. 3 1
84 71.24 humidity 50.0 1440 > th dose independent rect. 3 1
93 71.24 atmosphere 995.0 1440 > th dose independent rect. 3 1
94 71.24 radiation 1.0 1440 < th dose independent rect. 3 1
114 71.24 temperature 10.0 1440 > th dose independent rect. 4 23
162 73.93 wind 9.0 30 < th dose independent rect. 3 23
165 75.00 atmosphere 995.0 30 > th dose independent rect. 3 23
173 76.35 precipitation 0.1 30 < th dose independent rect. 3 23
174 76.35 precipitation 0.1 30 < th dose dependent rect. 3 23
197 82.29 humidity 50.0 30 > th dose independent rect. 3 23
237 85.42 temperature 30.0 30 < th dose independent rect. 3 23
260 87.23 humidity 90.0 90 < th dose independent rect. 2 1
281 88.30 wind 1.0 30 < th dose independent rect. 24 3
289 88.44 temperature 25.0 270 > th dose dependent rect. 23 7
313 89.18 atmosphere 1015.0 30 < th dose independent rect. 3 23
343 90.58 wind 1.0 10 < th dose independent rect. 12 15
368 90.73 wind 3.0 30 < th dose dependent rect. 2 6
377 90.88 wind 1.0 30 > th dose independent rect. 3 23
386 91.02 wind 9.0 10 > th dose independent rect. 18 1
389 91.02 wind 9.0 10 > th dose dependent rect. 18 1
404 91.18 wind 1.0 10 > th dose independent rect. 8 23
413 91.32 temperature 25.0 1440 < th dose independent rect. 1 1
464 91.70 wind 3.0 30 < th dose dependent rect. 2 11
477 91.82 wind 9.0 90 > th dose independent rect. 17 9
499 91.91 wind 9.0 90 > th dose dependent rect. 17 9
594 92.38 atmosphere 995.0 720 > th dose independent rect. 23 16
600 92.43 humidity 90.0 90 < th dose independent rect. 1 7
603 92.48 wind 9.0 90 > th dose independent sin 12 NA
604 92.48 atmosphere 995.0 720 > th dose independent rect. 7 8
638 92.64 atmosphere 995.0 720 > th dose independent rect. 15 16
639 92.65 wind 1.0 10 > th dose independent sin 15 NA
647 92.69 wind 9.0 90 > th dose dependent sin 13 NA
650 92.70 wind 1.0 30 < th dose independent rect. 2 10
658 92.74 atmosphere 1005.0 30 > th dose independent rect. 2 6
659 92.74 precipitation 0.1 720 < th dose independent rect. 15 8
661 92.74 precipitation 0.1 720 < th dose dependent rect. 15 8
691 92.83 humidity 90.0 10 > th dose independent rect. 24 3
704 92.88 wind 9.0 90 > th dose independent rect. 13 6
710 92.89 temperature 10.0 720 > th dose independent rect. 7 8
711 92.89 atmosphere 1015.0 720 < th dose independent rect. 7 8
721 92.89 temperature 10.0 720 > th dose independent rect. 15 16
729 92.89 wind 9.0 30 < th dose dependent rect. 3 23
754 92.95 precipitation 0.1 720 < th dose independent rect. 19 8
757 92.95 precipitation 0.1 720 < th dose dependent rect. 19 8
799 93.00 temperature 10.0 720 > th dose independent rect. 15 8
801 93.00 temperature 10.0 720 > th dose independent rect. 23 16
802 93.00 atmosphere 995.0 720 > th dose independent rect. 3 16
807 93.01 atmosphere 995.0 30 > th dose dependent rect. 3 23
812 93.05 wind 1.0 10 > th dose independent sin 7 NA
815 93.06 wind 9.0 90 > th dose dependent rect. 13 5
838 93.10 radiation 10.0 30 < th dose dependent rect. 3 23
840 93.11 atmosphere 995.0 720 > th dose independent rect. 15 8
841 93.13 humidity 80.0 10 < th dose independent rect. 6 2
845 93.16 precipitation 0.1 720 < th dose independent rect. 15 16
850 93.16 precipitation 0.1 720 < th dose dependent rect. 15 16
856 93.20 humidity 50.0 720 > th dose independent rect. 3 8
865 93.20 wind 9.0 90 > th dose dependent rect. 13 13
898 93.25 wind 9.0 720 < th dose independent rect. 19 8
901 93.27 temperature 10.0 720 > th dose independent rect. 19 8
902 93.27 temperature 30.0 720 < th dose independent rect. 19 8
903 93.27 humidity 50.0 720 > th dose independent rect. 19 8
904 93.27 atmosphere 995.0 720 > th dose independent rect. 19 8
905 93.27 radiation 1.0 720 < th dose independent rect. 19 8
910 93.27 temperature 10.0 720 > th dose independent rect. 3 16
912 93.27 radiation 1.0 720 < th dose dependent rect. 19 8
957 93.35 radiation 10.0 30 > th dose independent rect. 7 1
963 93.38 temperature 10.0 720 > th dose independent rect. 3 8
964 93.38 atmosphere 995.0 720 > th dose independent rect. 3 8
965 93.38 temperature 10.0 720 > th dose independent rect. 11 16
974 93.42 humidity 50.0 30 > th dose dependent rect. 3 23
979 93.48 atmosphere 995.0 720 > th dose independent rect. 11 16
981 93.50 humidity 80.0 10 < th dose independent rect. 23 9
989 93.52 precipitation 0.1 720 < th dose independent rect. 11 16
990 93.52 precipitation 0.1 720 < th dose dependent rect. 11 16
998 93.57 precipitation 0.1 720 < th dose independent rect. 7 8
999 93.57 precipitation 0.1 720 < th dose dependent rect. 7 8