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Os01g0544200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.72 (0.0463) R2 : 0.821
β1 : 0.824 (0.217) R2dD : 0.0151 R2D : 0.0995
β2 : 1.33 (0.0893) R2dC : 0.0871 R2C : 0.109
β3 : 2.21 (0.16) R2dE : 0.155 R2E : 0.45
β4 : -2.35 (0.351) R2dD*C : 0.0176 R2D*C : 0.0301
β5 : -5.03 (0.593) R2dD*E : 0.102 R2D*E : 0.343
γ1 : 0.949 (0.0993) R2dN8 : 0.0761 R2N8 : 0.155
σ : 0.697
deviance : 220.26
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_____
C
peak time of C : 1.79
E
wheather : temperature
threshold : 21.4
memory length : 4938
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
220.26 0.697 8.72 0.824 1.33 2.21 -2.35 -5.03 0.949 1.79 21.4 4938 -- --
253.32 0.741 8.52 1.94 1.3 2.81 -2.24 -- 1.33 1.9 21.15 5247 -- --
238.11 0.719 8.73 0.786 1.28 2.19 -- -5.23 0.918 2.22 21.69 5272 -- --
243.58 0.727 8.49 1.11 1.35 4.14 -- -- 1.23 2.19 18.85 7973 -- --
330.11 0.846 8.64 1.24 -- 2.25 -- -4.83 1.04 -- 22 2499 -- --
432.15 0.975 8.29 3.75 1.39 -- -2.39 -- 2.19 1.73 -- -- -- --
453.46 0.997 8.28 3.82 1.41 -- -- -- 2.2 2.13 -- -- -- --
345.87 0.866 8.51 0.881 -- 4.12 -- -- 1.18 -- 18.82 9675 -- --
235.7 0.715 8.5 -- 1.37 4.42 -- -- 0.948 1.87 18.7 21102 -- --
571.76 1.12 8.27 3.88 -- -- -- -- 2.23 -- -- -- -- --
838.7 1.35 8.38 -- 1.48 -- -- -- 1.77 2.19 -- -- -- --
334.63 0.852 8.56 -- -- 4.33 -- -- 0.951 -- 18.32 22580 -- --
969.28 1.45 8.37 -- -- -- -- -- 1.8 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 200.75 radiation 1.0 43200 > th dose independent rect. 18 11
2 202.07 radiation 1.0 43200 < th dose independent rect. 18 11
3 203.00 radiation 1.0 43200 > th dose independent rect. 18 1
14 204.39 humidity 90.0 14400 > th dose dependent rect. 5 1
16 204.44 wind 3.0 43200 < th dose dependent rect. 21 1
19 204.57 radiation 1.0 43200 < th dose independent rect. 18 1
21 204.64 radiation 1.0 43200 < th dose independent rect. 18 4
25 206.64 wind 3.0 43200 < th dose independent rect. 20 2
26 207.21 radiation 1.0 43200 > th dose independent rect. 9 3
27 207.21 radiation 1.0 43200 < th dose independent rect. 9 3
28 207.56 wind 3.0 43200 > th dose independent rect. 20 2
29 207.59 atmosphere 1015.0 43200 < th dose independent rect. 3 2
31 207.75 radiation 1.0 43200 < th dose dependent rect. 9 3
36 208.17 radiation 1.0 43200 < th dose dependent rect. 6 9
37 208.29 atmosphere 1015.0 43200 > th dose independent rect. 4 1
46 208.53 radiation 1.0 43200 < th dose independent rect. 7 8
48 208.59 radiation 1.0 43200 > th dose independent rect. 7 8
67 209.15 wind 3.0 43200 < th dose dependent rect. 20 3
69 209.25 radiation 1.0 43200 < th dose dependent rect. 6 1
80 209.57 temperature 20.0 43200 > th dose independent rect. 7 1
85 209.73 temperature 20.0 43200 < th dose independent rect. 7 1
86 209.74 wind 7.0 43200 > th dose dependent rect. 9 6
87 209.77 precipitation 0.1 43200 < th dose independent rect. 4 3
88 209.77 precipitation 0.1 43200 < th dose dependent rect. 4 3
89 209.85 humidity 90.0 43200 > th dose independent rect. 10 1
91 209.89 precipitation 0.1 43200 > th dose independent rect. 4 3
94 209.95 temperature 20.0 43200 > th dose independent rect. 6 3
98 210.05 atmosphere 1010.0 43200 > th dose dependent rect. 4 1
104 210.20 temperature 20.0 43200 < th dose independent rect. 6 3
107 210.29 humidity 90.0 43200 < th dose independent rect. 10 1
111 210.38 temperature 20.0 43200 < th dose independent rect. 19 4
113 210.39 precipitation 0.1 43200 > th dose dependent rect. 4 3
115 210.46 temperature 20.0 43200 < th dose independent rect. 21 1
118 210.48 temperature 20.0 43200 > th dose independent rect. 21 1
120 210.51 atmosphere 1010.0 43200 > th dose dependent rect. 2 4
129 210.66 temperature 20.0 43200 > th dose independent rect. 19 4
131 210.71 temperature 15.0 43200 < th dose independent rect. 2 1
136 210.73 wind 7.0 43200 > th dose independent rect. 9 3
140 210.77 wind 7.0 43200 < th dose independent rect. 9 3
155 210.92 temperature 20.0 43200 < th dose independent rect. 5 5
158 210.98 temperature 15.0 43200 > th dose independent rect. 2 1
176 211.20 radiation 1.0 43200 < th dose dependent rect. 23 6
182 211.23 radiation 1.0 43200 < th dose dependent rect. 20 9
198 211.38 temperature 25.0 43200 < th dose independent rect. 14 1
210 211.48 humidity 80.0 43200 > th dose dependent rect. 11 2
211 211.49 wind 5.0 43200 > th dose dependent rect. 10 2
235 211.64 atmosphere 1010.0 43200 > th dose independent rect. 16 2
239 211.65 temperature 20.0 43200 < th dose independent rect. 17 20
245 211.68 temperature 20.0 43200 < th dose independent sin 15 NA
261 211.74 temperature 20.0 43200 < th dose independent rect. 15 19
262 211.74 temperature 20.0 43200 < th dose independent rect. 12 22
272 211.79 temperature 20.0 43200 > th dose independent rect. 17 20
275 211.79 humidity 90.0 14400 > th dose dependent rect. 4 3
293 211.83 temperature 20.0 43200 < th dose dependent rect. 2 1
309 211.86 temperature 20.0 43200 > th dose independent rect. 12 22
324 211.89 atmosphere 1010.0 43200 > th dose independent rect. 12 7
330 211.90 temperature 20.0 43200 > th dose independent sin 15 NA
333 211.90 temperature 20.0 43200 > th dose independent rect. 15 19
356 211.94 temperature 20.0 43200 < th dose independent rect. 5 23
392 212.01 temperature 20.0 43200 < th dose independent no NA NA
397 212.02 temperature 25.0 4320 > th dose independent rect. 11 2
405 212.03 temperature 20.0 43200 > th dose independent rect. 5 23
417 212.05 atmosphere 1010.0 43200 < th dose independent rect. 9 9
422 212.06 atmosphere 1010.0 43200 < th dose independent rect. 11 8
434 212.07 wind 7.0 43200 > th dose dependent rect. 8 8
444 212.09 temperature 20.0 43200 < th dose independent rect. 1 23
446 212.09 atmosphere 1010.0 43200 > th dose dependent sin 10 NA
453 212.11 temperature 20.0 43200 > th dose independent no NA NA
490 212.16 temperature 20.0 43200 > th dose independent rect. 24 23
501 212.17 humidity 90.0 14400 > th dose dependent rect. 23 16
534 212.21 atmosphere 1010.0 43200 < th dose independent rect. 14 4
542 212.22 atmosphere 1010.0 43200 < th dose independent rect. 16 2
572 212.26 atmosphere 1010.0 43200 > th dose independent rect. 9 10
621 212.35 atmosphere 1010.0 43200 < th dose independent rect. 11 2
638 212.37 temperature 20.0 43200 < th dose independent sin 4 NA
650 212.39 atmosphere 1010.0 43200 > th dose independent rect. 11 2
660 212.40 temperature 20.0 43200 > th dose independent sin 4 NA
732 212.50 temperature 20.0 43200 < th dose independent rect. 2 12
739 212.51 temperature 20.0 43200 < th dose independent rect. 3 10
746 212.52 temperature 20.0 43200 > th dose independent rect. 2 12
769 212.55 atmosphere 1015.0 43200 > th dose dependent rect. 20 3
782 212.58 precipitation 0.1 43200 < th dose independent rect. 4 6
789 212.58 precipitation 0.1 43200 < th dose dependent rect. 4 6
793 212.59 temperature 25.0 43200 > th dose independent rect. 14 1
845 212.63 temperature 20.0 43200 > th dose independent rect. 1 14
846 212.63 atmosphere 1010.0 43200 < th dose independent rect. 5 14
924 212.73 precipitation 0.1 43200 > th dose independent rect. 4 6
943 212.74 atmosphere 1015.0 43200 > th dose dependent rect. 22 1
977 212.80 atmosphere 1010.0 43200 < th dose independent sin 23 NA