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Os01g0543600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.83 (0.114) R2 : 0.831
β1 : 4.8 (0.848) R2dD : 0.188 R2D : 0.462
β2 : 0.504 (0.152) R2dC : 0.00416 R2C : 0.00159
β3 : 1.86 (0.562) R2dE : 0.0391 R2E : -0.0461
β4 : 3.25 (0.651) R2dD*C : 0.0093 R2D*C : 0.0175
β5 : -27.8 (4.7) R2dD*E : 0.276 R2D*E : 0.448
γ1 : 2.52 (0.148) R2dN8 : 0.196 R2N8 : 0.0629
σ : 1.12
deviance : 570.93
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_____
C
peak time of C : 15.8
E
wheather : temperature
threshold : 28.8
memory length : 1601
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
570.93 1.12 7.83 4.8 0.504 1.86 3.25 -27.8 2.52 15.8 28.8 1601 -- --
630.08 1.18 7.25 9.48 1.02 -1.98 3.94 -- 3.05 16 28.8 1601 -- --
590.74 1.13 7.83 5.04 0.685 1.51 -- -24.7 2.53 18.4 28.85 1512 -- --
631.43 1.17 7.28 9.7 0.834 -1.33 -- -- 2.93 18.4 29.21 1585 -- --
616.92 1.16 7.83 4.89 -- 1.57 -- -25 2.52 -- 28.79 1500 -- --
670.22 1.21 7.23 9.33 0.657 -- 3.42 -- 3.09 15.9 -- -- -- --
693.37 1.23 7.24 9.37 0.834 -- -- -- 3.11 18 -- -- -- --
664.47 1.2 7.26 9.67 -- -1.23 -- -- 2.9 -- 29.18 1496 -- --
1470.37 1.79 7.89 -- 0.846 6.31 -- -- 0.179 17.5 1.493 47520 -- --
729.42 1.26 7.22 9.34 -- -- -- -- 3.09 -- -- -- -- --
3006.4 2.56 7.47 -- 0.704 -- -- -- 2.06 18.6 -- -- -- --
1507.55 1.81 7.88 -- -- 6.28 -- -- 0.171 -- 1.209 47520 -- --
3032.25 2.57 7.46 -- -- -- -- -- 2.05 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 555.99 wind 1.0 43200 < th dose independent rect. 5 1
2 563.51 wind 1.0 43200 < th dose dependent rect. 5 1
3 566.05 humidity 60.0 14400 > th dose independent rect. 12 1
4 568.25 humidity 60.0 14400 < th dose independent rect. 12 1
6 570.97 humidity 60.0 14400 < th dose dependent rect. 15 17
7 571.00 humidity 60.0 14400 < th dose dependent rect. 15 4
9 571.06 humidity 60.0 14400 < th dose dependent rect. 15 6
21 571.37 humidity 70.0 14400 < th dose dependent rect. 16 1
22 571.72 wind 1.0 14400 > th dose independent rect. 2 1
24 572.12 humidity 70.0 14400 < th dose independent rect. 16 1
50 573.52 humidity 50.0 14400 > th dose independent rect. 15 14
51 573.55 humidity 50.0 14400 > th dose independent rect. 15 9
54 573.58 humidity 50.0 14400 > th dose independent rect. 15 5
57 573.60 humidity 50.0 14400 > th dose independent rect. 15 17
70 573.74 wind 1.0 43200 < th dose dependent rect. 1 5
77 573.98 humidity 70.0 14400 > th dose independent rect. 16 15
78 573.99 humidity 70.0 14400 > th dose independent rect. 16 13
80 574.00 humidity 70.0 14400 > th dose independent rect. 16 7
88 574.08 humidity 80.0 14400 < th dose dependent sin 14 NA
92 574.17 wind 1.0 43200 > th dose independent rect. 5 1
113 574.64 wind 5.0 43200 < th dose dependent rect. 4 2
120 574.83 wind 1.0 43200 < th dose independent rect. 1 6
125 575.09 humidity 70.0 14400 > th dose independent rect. 16 1
126 575.09 temperature 30.0 1440 > th dose independent rect. 9 6
131 575.50 humidity 70.0 14400 < th dose independent rect. 16 15
132 575.53 humidity 70.0 14400 < th dose independent rect. 16 6
157 575.80 wind 9.0 43200 < th dose dependent rect. 7 1
158 575.81 temperature 30.0 1440 > th dose independent rect. 18 21
159 575.85 wind 1.0 43200 > th dose dependent rect. 7 1
179 575.93 humidity 70.0 14400 > th dose independent sin 12 NA
180 575.93 humidity 70.0 14400 < th dose independent rect. 19 13
182 575.98 humidity 70.0 14400 < th dose independent sin 12 NA
184 576.12 wind 1.0 43200 > th dose dependent rect. 4 2
231 576.63 humidity 80.0 14400 < th dose dependent rect. 19 1
233 576.69 humidity 70.0 14400 > th dose independent rect. 19 13
248 577.18 humidity 70.0 14400 < th dose independent rect. 15 19
270 577.51 wind 1.0 14400 < th dose independent rect. 2 1
271 577.53 wind 1.0 14400 < th dose independent rect. 2 4
277 577.59 wind 9.0 43200 < th dose dependent rect. 4 4
282 577.72 temperature 30.0 1440 > th dose independent sin 4 NA
304 577.90 humidity 60.0 14400 > th dose independent rect. 12 20
306 577.97 humidity 60.0 14400 > th dose independent rect. 12 11
309 577.97 humidity 60.0 14400 > th dose independent rect. 12 17
323 578.08 temperature 30.0 1440 < th dose independent rect. 9 6
329 578.22 temperature 30.0 1440 > th dose dependent rect. 14 1
337 578.40 temperature 30.0 1440 < th dose independent sin 5 NA
348 578.49 wind 1.0 43200 > th dose dependent rect. 4 4
366 578.65 wind 1.0 14400 > th dose independent rect. 2 3
373 578.68 wind 1.0 43200 < th dose dependent rect. 3 4
379 578.72 temperature 30.0 1440 < th dose independent rect. 3 12
380 578.74 temperature 30.0 1440 < th dose independent rect. 1 14
396 578.88 temperature 30.0 1440 < th dose independent rect. 23 16
422 579.12 temperature 30.0 1440 < th dose independent rect. 19 20
451 579.63 temperature 25.0 4320 < th dose independent rect. 6 1
457 579.72 temperature 25.0 4320 > th dose independent rect. 6 1
493 579.92 humidity 60.0 14400 < th dose independent rect. 12 20
502 580.00 humidity 60.0 14400 < th dose independent rect. 12 10
561 580.28 temperature 30.0 1440 > th dose independent no NA NA
713 580.64 humidity 70.0 14400 < th dose independent rect. 9 13
750 580.81 precipitation 0.1 14400 < th dose independent rect. 13 14
751 580.81 precipitation 0.1 14400 < th dose dependent rect. 13 14
760 580.88 temperature 30.0 14400 > th dose independent rect. 18 17
774 580.94 temperature 30.0 14400 < th dose independent rect. 19 16
776 580.95 temperature 30.0 14400 > th dose independent rect. 8 3
790 580.96 temperature 30.0 14400 < th dose independent rect. 6 5
791 580.96 temperature 30.0 14400 < th dose independent rect. 22 13
804 580.98 temperature 30.0 14400 < th dose independent rect. 4 7
835 581.04 humidity 70.0 14400 < th dose independent no NA NA
886 581.08 precipitation 0.1 14400 > th dose independent rect. 13 14
900 581.11 temperature 30.0 1440 > th dose independent rect. 12 23
943 581.37 temperature 30.0 14400 > th dose independent rect. 10 1
951 581.43 humidity 70.0 14400 < th dose independent rect. 18 23
959 581.49 atmosphere 995.0 43200 < th dose dependent rect. 15 11