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Os01g0543000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.39 (0.023) R2 : 0.394
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.852 (0.0592) R2dC : 0.278 R2C : 0.249
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.443 (0.0483) R2dN8 : 0.145 R2N8 : 0.116
σ : 0.433
deviance : 85.71
__
_____
C
peak time of C : 7.57
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.74 0.401 8.43 -0.341 0.888 -0.906 -0.205 -0.0468 0.236 6.65 25.77 10 -- --
72.47 0.4 8.44 -0.347 0.883 -0.91 -0.206 -- 0.234 6.64 25.77 10 -- --
72.57 0.4 8.43 -0.341 0.884 -0.92 -- -0.0716 0.236 6.62 25.77 10 -- --
72.57 0.399 8.44 -0.352 0.883 -0.915 -- -- 0.233 6.62 25.77 10 -- --
110.95 0.493 8.44 -0.31 -- -0.919 -- -0.127 0.299 -- 24.1 10 -- --
84.94 0.432 8.39 -0.132 0.854 -- -0.303 -- 0.427 7.57 -- -- -- --
85.2 0.432 8.39 -0.139 0.854 -- -- -- 0.428 7.56 -- -- -- --
110.98 0.493 8.44 -0.327 -- -0.908 -- -- 0.295 -- 24.1 10 -- --
75.56 0.407 8.42 -- 0.872 -0.784 -- -- 0.297 6.77 25.77 10 -- --
124.25 0.521 8.41 -0.127 -- -- -- -- 0.441 -- -- -- -- --
85.71 0.433 8.39 -- 0.852 -- -- -- 0.443 7.57 -- -- -- --
113.59 0.498 8.43 -- -- -0.798 -- -- 0.346 -- 24.1 10 -- --
124.68 0.521 8.41 -- -- -- -- -- 0.455 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.01 temperature 30.0 10 < th dose dependent rect. 12 21
14 70.35 temperature 15.0 10 > th dose dependent rect. 9 16
46 71.81 temperature 20.0 10 > th dose independent rect. 9 16
83 72.44 temperature 20.0 30 > th dose independent rect. 20 17
88 72.50 temperature 15.0 10 > th dose dependent rect. 9 21
109 72.75 temperature 25.0 10 < th dose dependent rect. 1 23
115 72.82 temperature 20.0 10 > th dose independent rect. 9 21
129 72.93 temperature 25.0 10 < th dose dependent rect. 10 23
136 72.98 temperature 25.0 10 < th dose dependent rect. 3 23
140 73.01 temperature 30.0 10 < th dose dependent rect. 23 23
145 73.05 temperature 25.0 10 < th dose dependent no NA NA
152 73.07 temperature 25.0 10 < th dose dependent rect. 17 23
154 73.09 temperature 25.0 10 < th dose dependent rect. 15 23
156 73.10 temperature 25.0 10 < th dose dependent rect. 5 23
173 73.16 temperature 30.0 10 < th dose dependent rect. 21 23
187 73.22 temperature 25.0 10 < th dose dependent rect. 7 23
195 73.25 temperature 25.0 10 < th dose dependent rect. 19 23
196 73.26 temperature 15.0 270 > th dose dependent rect. 17 10
219 73.37 wind 9.0 14400 > th dose dependent rect. 17 4
221 73.38 wind 1.0 43200 > th dose independent rect. 8 2
231 73.41 temperature 15.0 10 > th dose dependent rect. 20 17
243 73.47 wind 9.0 14400 > th dose dependent sin 13 NA
247 73.49 wind 9.0 14400 > th dose dependent rect. 17 7
262 73.55 temperature 15.0 270 > th dose dependent rect. 17 19
263 73.55 wind 5.0 14400 > th dose dependent rect. 19 21
276 73.61 wind 9.0 14400 > th dose dependent rect. 17 19
293 73.66 humidity 80.0 43200 > th dose independent rect. 21 3
313 73.74 wind 1.0 43200 < th dose dependent rect. 8 2
319 73.77 wind 7.0 14400 < th dose independent rect. 19 21
331 73.82 humidity 80.0 43200 > th dose independent rect. 22 1
356 73.89 wind 7.0 14400 > th dose independent rect. 19 21
365 73.91 humidity 80.0 43200 < th dose independent rect. 21 2
379 73.93 wind 1.0 43200 < th dose dependent rect. 4 22
388 73.96 wind 9.0 14400 > th dose independent rect. 17 4
395 73.98 humidity 80.0 43200 < th dose independent rect. 5 1
402 73.99 radiation 1.0 43200 < th dose dependent rect. 21 3
412 74.02 wind 5.0 14400 > th dose independent rect. 3 13
420 74.04 wind 5.0 14400 > th dose independent rect. 24 16
426 74.05 wind 5.0 14400 > th dose independent sin 3 NA
428 74.05 wind 5.0 14400 < th dose independent rect. 3 13
431 74.06 wind 5.0 14400 < th dose independent rect. 24 16
438 74.07 wind 5.0 14400 > th dose dependent rect. 13 23
443 74.08 humidity 80.0 43200 < th dose dependent rect. 4 2
452 74.10 wind 5.0 14400 < th dose independent sin 3 NA
464 74.13 wind 9.0 14400 > th dose independent rect. 17 8
466 74.13 humidity 80.0 43200 < th dose dependent rect. 1 6
477 74.15 wind 9.0 14400 > th dose independent rect. 17 19
480 74.16 humidity 80.0 43200 < th dose independent rect. 21 9
487 74.17 humidity 80.0 43200 < th dose dependent rect. 20 11
505 74.19 wind 5.0 14400 > th dose dependent rect. 23 23
510 74.20 wind 5.0 14400 > th dose dependent no NA NA
521 74.21 temperature 30.0 720 < th dose dependent rect. 10 13
523 74.21 wind 5.0 14400 > th dose dependent rect. 3 23
525 74.22 precipitation 0.1 43200 > th dose independent rect. 17 1
544 74.23 wind 5.0 14400 > th dose dependent rect. 5 23
558 74.25 wind 5.0 14400 > th dose dependent rect. 10 23
560 74.26 precipitation 0.1 43200 > th dose dependent rect. 17 1
620 74.33 temperature 30.0 10 < th dose dependent rect. 23 21
621 74.34 wind 9.0 14400 > th dose independent sin 12 NA
622 74.34 precipitation 0.1 43200 < th dose independent rect. 17 1
623 74.34 wind 9.0 14400 < th dose independent rect. 19 7
626 74.34 precipitation 0.1 43200 < th dose dependent rect. 17 1
633 74.34 wind 1.0 43200 < th dose dependent rect. 8 22
654 74.37 temperature 30.0 720 < th dose dependent rect. 17 5
662 74.38 wind 9.0 14400 < th dose independent rect. 19 5
752 74.46 wind 7.0 14400 > th dose independent rect. 14 22
765 74.47 wind 5.0 14400 > th dose independent rect. 24 22
770 74.48 wind 1.0 43200 < th dose independent rect. 8 2
773 74.48 humidity 80.0 43200 < th dose dependent rect. 1 1
782 74.49 wind 7.0 14400 < th dose independent rect. 14 22
791 74.50 wind 9.0 14400 > th dose independent rect. 19 3
792 74.50 wind 9.0 14400 < th dose independent rect. 17 4
816 74.51 wind 9.0 14400 > th dose dependent rect. 20 5
826 74.52 wind 9.0 14400 < th dose independent rect. 18 17
829 74.52 wind 9.0 14400 > th dose dependent rect. 19 3
859 74.53 temperature 20.0 10 > th dose dependent rect. 20 10
867 74.54 wind 9.0 14400 < th dose independent sin 13 NA
875 74.54 radiation 1.0 43200 < th dose dependent rect. 21 7
959 74.60 wind 5.0 14400 > th dose dependent sin 4 NA
966 74.61 wind 5.0 14400 > th dose independent no NA NA
993 74.63 wind 5.0 14400 > th dose independent rect. 3 23