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Os01g0541900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0169) R2 : 0.341
β1 : -0.95 (0.0618) R2dD : 0.354 R2D : 0.322
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.113 (0.0361) R2dN8 : 0.0192 R2N8 : -0.0127
σ : 0.317
deviance : 46.01
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.23 0.245 11.5 -1.04 0.474 0.417 0.056 -0.589 -0.103 4.26 1.325 103 -- --
27.41 0.244 11.5 -1.03 0.478 0.338 0.0251 -- -0.0987 4.3 1.362 103 -- --
27.23 0.243 11.5 -1.04 0.478 0.423 -- -0.572 -0.102 4.25 1.259 103 -- --
27.39 0.244 11.5 -1.02 0.473 0.329 -- -- -0.103 4.27 1.423 103 -- --
33.45 0.269 11.5 -1.11 -- 0.631 -- -0.151 -0.0928 -- 3.181 71 -- --
28.86 0.252 11.5 -0.971 0.564 -- 0.12 -- -0.128 4.41 -- -- -- --
28.9 0.252 11.5 -0.972 0.565 -- -- -- -0.128 4.39 -- -- -- --
33.49 0.27 11.5 -1.12 -- 0.61 -- -- -0.0956 -- 3.269 71 -- --
51.6 0.335 11.5 -- 0.711 -0.417 -- -- -0.0292 4.35 14.18 4 -- --
46.01 0.317 11.5 -0.95 -- -- -- -- -0.113 -- -- -- -- --
53.8 0.343 11.5 -- 0.546 -- -- -- -0.0202 4.43 -- -- -- --
64.46 0.374 11.5 -- -- 0.367 -- -- 0.0163 -- 3.202 96 -- --
69.8 0.39 11.5 -- -- -- -- -- -0.00811 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.60 temperature 10 270 > th dose dependent rect. 6 8
6 25.75 temperature 25 270 < th dose independent rect. 1 10
17 26.03 wind 1 90 > th dose independent rect. 23 16
29 26.17 wind 3 90 < th dose dependent sin 3 NA
31 26.18 temperature 25 270 < th dose independent rect. 1 18
32 26.18 wind 3 90 < th dose dependent rect. 3 9
33 26.19 atmosphere 1010 30 < th dose independent rect. 8 9
57 26.28 wind 1 270 > th dose independent rect. 4 10
60 26.29 temperature 25 270 > th dose independent rect. 7 7
62 26.30 atmosphere 1000 10 > th dose independent rect. 5 18
63 26.30 wind 3 14400 < th dose dependent rect. 9 2
74 26.33 wind 1 90 > th dose independent rect. 19 22
75 26.33 wind 3 10 < th dose dependent rect. 12 1
78 26.34 temperature 20 30 > th dose independent rect. 17 15
82 26.35 wind 1 270 < th dose independent rect. 2 10
85 26.35 atmosphere 1000 30 > th dose independent rect. 2 21
87 26.36 wind 1 90 > th dose independent sin 2 NA
88 26.37 atmosphere 1010 30 < th dose independent rect. 8 7
102 26.41 temperature 25 270 < th dose independent sin 4 NA
120 26.43 temperature 15 30 > th dose dependent rect. 8 9
121 26.43 temperature 30 270 < th dose dependent rect. 1 10
122 26.43 wind 3 90 < th dose dependent rect. 3 13
123 26.44 wind 3 10 < th dose independent rect. 12 1
127 26.44 temperature 25 270 > th dose independent rect. 1 13
135 26.45 atmosphere 1000 30 > th dose independent rect. 24 23
150 26.46 wind 3 90 < th dose dependent rect. 3 16
163 26.47 wind 9 14400 > th dose dependent rect. 18 20
176 26.49 wind 1 43200 < th dose independent rect. 9 3
179 26.49 temperature 25 270 > th dose independent rect. 4 10
181 26.49 temperature 20 30 > th dose independent rect. 17 13
198 26.50 wind 9 14400 > th dose dependent rect. 18 22
204 26.51 wind 1 270 < th dose independent rect. 2 17
205 26.51 temperature 20 30 > th dose independent rect. 15 17
212 26.52 wind 1 43200 > th dose independent rect. 9 3
218 26.52 wind 7 14400 > th dose dependent rect. 12 2
227 26.53 wind 1 90 < th dose independent sin 2 NA
244 26.54 wind 7 270 < th dose independent rect. 19 19
245 26.54 temperature 30 270 < th dose dependent rect. 1 18
249 26.56 wind 9 14400 < th dose independent rect. 12 3
269 26.58 wind 7 14400 > th dose independent rect. 12 2
293 26.59 wind 9 14400 > th dose independent rect. 18 22
308 26.60 humidity 50 10 > th dose independent rect. 23 16
319 26.60 wind 9 14400 > th dose dependent rect. 20 20
323 26.61 wind 1 90 < th dose independent rect. 3 14
324 26.61 atmosphere 1010 10 < th dose independent rect. 17 15
326 26.61 wind 9 14400 > th dose dependent rect. 12 7
353 26.62 wind 9 14400 > th dose independent rect. 20 20
354 26.62 wind 9 14400 > th dose dependent sin 22 NA
360 26.62 temperature 30 270 < th dose dependent rect. 1 14
363 26.63 wind 7 270 < th dose independent rect. 6 8
379 26.64 atmosphere 1000 30 > th dose independent rect. 15 8
381 26.64 wind 9 14400 < th dose independent rect. 18 22
383 26.64 wind 1 14400 > th dose dependent rect. 9 4
402 26.65 wind 9 14400 > th dose dependent rect. 10 9
416 26.66 wind 9 14400 > th dose independent rect. 18 20
417 26.66 wind 9 14400 < th dose independent rect. 20 20
436 26.67 wind 9 14400 > th dose independent rect. 12 7
456 26.67 wind 7 14400 > th dose dependent rect. 6 10
469 26.68 wind 9 14400 < th dose independent rect. 8 8
471 26.68 humidity 50 10 > th dose independent rect. 8 9
477 26.68 atmosphere 1000 30 > th dose independent rect. 5 14
480 26.68 wind 1 270 > th dose independent rect. 19 19
532 26.70 atmosphere 1000 90 < th dose independent rect. 9 6
534 26.70 wind 9 14400 < th dose independent rect. 12 7
535 26.70 wind 9 14400 > th dose independent rect. 12 9
558 26.71 wind 9 14400 > th dose independent sin 22 NA
575 26.71 wind 7 30 < th dose independent rect. 23 16
618 26.72 atmosphere 1015 90 < th dose dependent rect. 8 7
650 26.73 wind 9 14400 > th dose independent rect. 10 11
656 26.73 atmosphere 1000 270 > th dose independent rect. 2 17
660 26.73 wind 7 14400 > th dose dependent rect. 15 1
704 26.74 wind 9 14400 < th dose independent sin 23 NA
714 26.74 wind 9 14400 > th dose independent rect. 10 9
810 26.75 wind 9 14400 > th dose dependent rect. 12 23
835 26.76 temperature 15 30 > th dose independent rect. 23 16
837 26.76 temperature 15 270 > th dose independent rect. 19 19
903 26.77 atmosphere 1015 30 < th dose dependent rect. 8 9
959 26.78 wind 9 14400 > th dose dependent no NA NA
981 26.78 wind 9 14400 > th dose dependent rect. 15 23
986 26.79 temperature 25 10 > th dose independent rect. 8 7