Os01g0540300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0540300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.49 | 0.473 | 3.24 | -1.4 | 0.193 | 0.753 | 0.495 | -4.66 | -0.113 | 6.56 | 26.42 | 5626 | -- | -- |
| 107.18 | 0.482 | 3.11 | -0.316 | 0.168 | 0.414 | 0.334 | -- | 0.0227 | 5.67 | 18.28 | 8645 | -- | -- |
| 102.07 | 0.471 | 3.23 | -1.36 | 0.196 | 0.747 | -- | -4.59 | -0.103 | 6.63 | 26.58 | 5610 | -- | -- |
| 107.31 | 0.482 | 3.11 | -0.262 | 0.202 | 0.411 | -- | -- | 0.0351 | 7.02 | 18.21 | 8228 | -- | -- |
| 103.93 | 0.475 | 3.25 | -1.48 | -- | 0.824 | -- | -5.18 | -0.103 | -- | 27.12 | 5635 | -- | -- |
| 110.9 | 0.494 | 3.08 | -0.0469 | 0.205 | -- | 0.447 | -- | 0.174 | 6.45 | -- | -- | -- | -- |
| 111.4 | 0.494 | 3.08 | -0.0406 | 0.207 | -- | -- | -- | 0.173 | 6.59 | -- | -- | -- | -- |
| 109.35 | 0.487 | 3.11 | -0.258 | -- | 0.392 | -- | -- | 0.0304 | -- | 19.24 | 8536 | -- | -- |
| 108.2 | 0.484 | 3.1 | -- | 0.197 | 0.271 | -- | -- | 0.0856 | 7.23 | 25.4 | 8418 | -- | -- |
| 113.62 | 0.498 | 3.08 | -0.0356 | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
| 111.44 | 0.494 | 3.08 | -- | 0.206 | -- | -- | -- | 0.177 | 6.61 | -- | -- | -- | -- |
| 110.21 | 0.489 | 3.1 | -- | -- | 0.272 | -- | -- | 0.0909 | -- | 25.39 | 8499 | -- | -- |
| 113.65 | 0.498 | 3.08 | -- | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.59 | temperature | 25.0 | 10 | > th | dose independent | rect. | 21 | 1 |
| 3 | 100.62 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 12 |
| 4 | 100.63 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 18 | 15 |
| 6 | 100.70 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 31 | 101.78 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 32 | 101.80 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 35 | 101.87 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 38 | 101.87 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 41 | 101.87 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 42 | 101.87 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 46 | 101.88 | radiation | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 48 | 101.89 | humidity | 70.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 51 | 101.90 | wind | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 56 | 101.92 | wind | 3.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 71 | 102.01 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 73 | 102.02 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 80 | 102.07 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 82 | 102.09 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 83 | 102.09 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 85 | 102.09 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 91 | 102.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 93 | 102.10 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 94 | 102.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 97 | 102.10 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 100 | 102.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 101 | 102.10 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 102 | 102.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 113 | 102.14 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 14 | NA |
| 116 | 102.15 | temperature | 25.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 119 | 102.18 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 131 | 102.24 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 137 | 102.29 | temperature | 25.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 139 | 102.30 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 143 | 102.32 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 158 | 102.40 | temperature | 25.0 | 10 | > th | dose independent | rect. | 18 | 16 |
| 179 | 102.53 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 18 | 15 |
| 193 | 102.62 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 204 | 102.70 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 207 | 102.71 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 211 | 102.74 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 16 | 17 |
| 215 | 102.76 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 218 | 102.76 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 219 | 102.76 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 232 | 102.79 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 15 |
| 234 | 102.80 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 237 | 102.82 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 261 | 102.94 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 268 | 102.97 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 277 | 102.99 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 289 | 103.00 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 290 | 103.01 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 295 | 103.02 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 302 | 103.03 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 303 | 103.03 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 304 | 103.03 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 333 | 103.04 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 14 | 13 |
| 343 | 103.06 | humidity | 90.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 371 | 103.12 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 381 | 103.14 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 383 | 103.14 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 390 | 103.16 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 391 | 103.16 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 414 | 103.18 | radiation | 40.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 428 | 103.19 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 439 | 103.21 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 506 | 103.23 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 513 | 103.25 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 520 | 103.25 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 536 | 103.28 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 548 | 103.29 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 570 | 103.31 | temperature | 25.0 | 10 | > th | dose independent | rect. | 21 | 13 |
| 606 | 103.33 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 612 | 103.34 | radiation | 10.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 614 | 103.34 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 630 | 103.35 | humidity | 90.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 650 | 103.35 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 684 | 103.37 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 685 | 103.38 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 692 | 103.38 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 729 | 103.40 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 732 | 103.40 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 739 | 103.41 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 753 | 103.42 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 806 | 103.43 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 827 | 103.43 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 14 | 10 |
| 883 | 103.45 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 14 | 8 |
| 939 | 103.47 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 23 |
| 940 | 103.47 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 951 | 103.47 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 23 |