Os01g0536000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CBL-interacting serine/threonine-protein kinase 24 (EC 2.7.1.37) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein).
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Os01g0536000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CBL-interacting serine/threonine-protein kinase 24 (EC 2.7.1.37) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.46 | 0.334 | 10.6 | -0.137 | 2.32 | -0.527 | -0.575 | 3.55 | -0.165 | 6.82 | 94.64 | 171 | -- | -- |
| 54.1 | 0.343 | 10.6 | -0.168 | 2.3 | -0.996 | -0.0495 | -- | -0.147 | 6.81 | 95.8 | 254 | -- | -- |
| 51.05 | 0.333 | 10.6 | -0.152 | 2.32 | -0.595 | -- | 3.29 | -0.173 | 6.82 | 94.77 | 174 | -- | -- |
| 54.01 | 0.342 | 10.6 | -0.144 | 2.32 | -1.06 | -- | -- | -0.141 | 6.84 | 95.2 | 248 | -- | -- |
| 246.47 | 0.731 | 10.5 | -0.34 | -- | 1.92 | -- | 0.499 | 0.406 | -- | 88.16 | 486 | -- | -- |
| 57.32 | 0.355 | 10.6 | -0.136 | 2.28 | -- | -0.0785 | -- | -0.133 | 6.86 | -- | -- | -- | -- |
| 57.34 | 0.355 | 10.6 | -0.137 | 2.28 | -- | -- | -- | -0.133 | 6.86 | -- | -- | -- | -- |
| 186.65 | 0.636 | 10.6 | -0.109 | -- | 2.08 | -- | -- | 0.0124 | -- | 63.85 | 504 | -- | -- |
| 54.51 | 0.344 | 10.6 | -- | 2.34 | -1.05 | -- | -- | -0.138 | 6.84 | 94.93 | 253 | -- | -- |
| 329.8 | 0.849 | 10.7 | -0.088 | -- | -- | -- | -- | -0.0892 | -- | -- | -- | -- | -- |
| 57.83 | 0.356 | 10.6 | -- | 2.28 | -- | -- | -- | -0.117 | 6.87 | -- | -- | -- | -- |
| 187 | 0.637 | 10.6 | -- | -- | 2.08 | -- | -- | 0.0394 | -- | 63.96 | 506 | -- | -- |
| 330.01 | 0.848 | 10.7 | -- | -- | -- | -- | -- | -0.0794 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.53 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 6 | 45.81 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 8 | 45.81 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 9 | 45.82 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 10 | 45.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 11 | 45.88 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 12 | 45.88 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 13 | 45.88 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 14 | 45.88 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 24 | 45.98 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 26 | 45.99 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 27 | 45.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 87 | 47.95 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 88 | 47.95 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 92 | 48.06 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 94 | 48.17 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 99 | 48.39 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 100 | 48.47 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 101 | 48.55 | temperature | 20.0 | 720 | > th | dose independent | rect. | 22 | 4 |
| 102 | 48.58 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 11 |
| 105 | 48.63 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 129 | 49.13 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 131 | 49.13 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 133 | 49.13 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 185 | 49.13 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 187 | 49.13 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 189 | 49.13 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 253 | 49.35 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 256 | 49.39 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 264 | 49.50 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 266 | 49.52 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 271 | 49.56 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 5 |
| 277 | 49.63 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 288 | 49.77 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 370 | 50.17 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 19 |
| 380 | 50.20 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 418 | 50.38 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 423 | 50.40 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 1 |
| 438 | 50.45 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 463 | 50.51 | wind | 7.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 472 | 50.56 | wind | 5.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 480 | 50.59 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 10 |
| 489 | 50.64 | temperature | 20.0 | 720 | > th | dose independent | sin | 11 | NA |
| 500 | 50.67 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 514 | 50.67 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 530 | 50.69 | temperature | 20.0 | 720 | < th | dose independent | sin | 11 | NA |
| 575 | 50.83 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 596 | 50.89 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 15 |
| 599 | 50.89 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 621 | 50.93 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 637 | 50.96 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 663 | 50.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 17 |
| 697 | 51.06 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 723 | 51.08 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 16 |
| 725 | 51.08 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 741 | 51.10 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 827 | 51.19 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 849 | 51.22 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 889 | 51.25 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 918 | 51.28 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 928 | 51.30 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 954 | 51.33 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 978 | 51.35 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |