Os01g0534900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hv711N16.16 (Fragment).
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Os01g0534900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hv711N16.16 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.75 | 0.417 | 10.7 | -2.83 | 0.811 | 1.26 | -1.03 | -6.53 | -0.113 | 13.7 | 26.71 | 1531 | -- | -- |
| 85.57 | 0.431 | 10.5 | -1.46 | 0.824 | 0.761 | -0.925 | -- | 0.0267 | 13.9 | 18.84 | 6079 | -- | -- |
| 82.73 | 0.424 | 10.7 | -2.79 | 0.806 | 1.29 | -- | -6.56 | -0.0987 | 13.9 | 26.8 | 1578 | -- | -- |
| 88.83 | 0.439 | 10.6 | -1.69 | 0.829 | 1.03 | -- | -- | -0.111 | 14.3 | 14.8 | 7251 | -- | -- |
| 112.76 | 0.497 | 10.6 | -1.81 | -- | 1.55 | -- | -6.24 | 0.0638 | -- | 26.6 | 1680 | -- | -- |
| 100.73 | 0.471 | 10.5 | -1.08 | 0.818 | -- | -1.07 | -- | 0.218 | 13.9 | -- | -- | -- | -- |
| 104.98 | 0.48 | 10.5 | -1.11 | 0.823 | -- | -- | -- | 0.213 | 14.1 | -- | -- | -- | -- |
| 107.04 | 0.484 | 10.5 | -1.44 | -- | 1.61 | -- | -- | -0.0239 | -- | 14.8 | 7251 | -- | -- |
| 134.9 | 0.541 | 10.5 | -- | 0.891 | 0.418 | -- | -- | 0.283 | 13.9 | 0.7177 | 895 | -- | -- |
| 145.54 | 0.564 | 10.5 | -1.15 | -- | -- | -- | -- | 0.194 | -- | -- | -- | -- | -- |
| 137.63 | 0.549 | 10.5 | -- | 0.844 | -- | -- | -- | 0.337 | 14.1 | -- | -- | -- | -- |
| 157.21 | 0.586 | 10.5 | -- | -- | 0.986 | -- | -- | 0.183 | -- | 19.6 | 18 | -- | -- |
| 180.27 | 0.627 | 10.5 | -- | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 74.88 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 3 | 74.90 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 8 | 75.14 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 9 | 75.15 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 10 | 75.17 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 13 | 75.24 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 14 | 75.24 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 21 | 75.31 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 39 | 75.54 | wind | 3 | 43200 | > th | dose dependent | sin | 22 | NA |
| 43 | 75.56 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 74 | 75.78 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 89 | 75.85 | wind | 5 | 43200 | < th | dose independent | sin | 22 | NA |
| 113 | 75.94 | wind | 5 | 43200 | > th | dose independent | sin | 21 | NA |
| 268 | 76.47 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 312 | 76.58 | wind | 9 | 43200 | < th | dose dependent | sin | 23 | NA |
| 388 | 76.73 | wind | 5 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 445 | 76.83 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 454 | 76.84 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 492 | 76.90 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 560 | 77.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 600 | 77.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 637 | 77.16 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 687 | 77.25 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 788 | 77.40 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 818 | 77.44 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 7 |
| 827 | 77.46 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 838 | 77.47 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 855 | 77.49 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 875 | 77.52 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 881 | 77.52 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 882 | 77.53 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 957 | 77.61 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 968 | 77.62 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 7 |
| 973 | 77.63 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 979 | 77.63 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |