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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0533900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Multidrug resistance protein 1 homolog.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.73 (0.0353) R2 : 0.336
β1 : -2.05 (0.148) R2dD : 0.408 R2D : 0.0327
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.84 (0.155) R2dE : 0.332 R2E : -0.0795
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.396 (0.0836) R2dN8 : 0.0592 R2N8 : -0.0929
σ : 0.637
deviance : 186.8
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : -2.274
memory length : 7214
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
171.57 0.615 4.81 -2.63 0.496 1.46 -0.371 -3.53 -0.503 9.13 21.83 1428 -- --
173.7 0.614 4.71 -1.94 0.459 1.75 -0.373 -- -0.377 9.42 4.148 7152 -- --
172.04 0.611 4.8 -2.63 0.498 1.46 -- -3.5 -0.499 9.2 21.84 1416 -- --
173.42 0.613 4.72 -2.05 0.487 1.86 -- -- -0.404 9.09 -10.37 7095 -- --
186.26 0.636 4.81 -2.59 -- 1.42 -- -3.37 -0.481 -- 21.8 1446 -- --
232.02 0.714 4.61 -1.1 0.481 -- -0.345 -- 0.0837 8.43 -- -- -- --
232.4 0.714 4.61 -1.11 0.481 -- -- -- 0.0838 8.43 -- -- -- --
186.8 0.637 4.73 -2.05 -- 1.84 -- -- -0.396 -- -2.274 7214 -- --
238.56 0.719 4.62 -- 0.617 0.901 -- -- 0.0456 9.68 21.3 1217 -- --
245.32 0.732 4.63 -1.11 -- -- -- -- 0.0886 -- -- -- -- --
264.93 0.761 4.59 -- 0.477 -- -- -- 0.208 8.6 -- -- -- --
252.46 0.74 4.63 -- -- 0.799 -- -- 0.0563 -- 21.7 1412 -- --
277.73 0.778 4.6 -- -- -- -- -- 0.212 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 168.72 wind 3 43200 > th dose dependent rect. 20 1
2 169.71 wind 5 43200 > th dose dependent rect. 10 15
3 169.75 temperature 20 1440 > th dose dependent rect. 16 6
4 169.81 temperature 20 1440 > th dose dependent rect. 18 1
7 169.88 wind 5 43200 > th dose dependent sin 17 NA
20 170.11 temperature 10 1440 > th dose dependent rect. 18 1
31 170.22 wind 5 43200 > th dose dependent rect. 13 12
79 170.65 wind 5 43200 > th dose dependent rect. 5 17
83 170.68 temperature 20 1440 > th dose dependent rect. 13 18
84 170.69 temperature 20 1440 > th dose dependent rect. 13 16
86 170.71 wind 5 43200 > th dose independent rect. 19 2
101 170.83 temperature 30 1440 < th dose dependent rect. 18 1
103 170.86 temperature 20 1440 > th dose dependent sin 16 NA
111 170.90 wind 7 43200 < th dose independent rect. 5 17
116 170.91 wind 7 43200 < th dose independent rect. 5 20
129 170.98 wind 7 43200 > th dose independent rect. 5 16
131 170.99 wind 7 43200 > th dose independent rect. 5 20
141 171.01 wind 5 43200 > th dose dependent rect. 5 20
160 171.10 wind 7 43200 < th dose independent rect. 11 21
178 171.16 wind 5 43200 > th dose independent rect. 8 17
185 171.18 wind 7 43200 < th dose independent sin 17 NA
187 171.18 wind 7 43200 > th dose independent rect. 13 18
188 171.18 wind 7 43200 < th dose independent rect. 13 18
189 171.18 wind 7 43200 < th dose independent rect. 2 19
193 171.19 wind 7 43200 < th dose independent rect. 13 14
195 171.19 wind 7 43200 > th dose independent rect. 2 19
196 171.19 wind 7 43200 > th dose independent rect. 11 21
200 171.20 wind 7 43200 < th dose independent rect. 24 21
201 171.20 wind 7 43200 > th dose independent rect. 23 22
245 171.32 wind 5 43200 < th dose independent rect. 19 2
262 171.35 wind 7 43200 < th dose independent rect. 10 17
295 171.43 wind 7 43200 > th dose independent sin 16 NA
296 171.43 wind 7 43200 > th dose independent rect. 13 14
334 171.51 wind 7 43200 > th dose independent rect. 13 23
340 171.53 wind 7 43200 < th dose independent rect. 14 11
343 171.53 wind 7 43200 < th dose independent rect. 13 23
444 171.72 wind 7 43200 > th dose independent rect. 14 11
454 171.73 wind 5 43200 > th dose dependent rect. 24 21
459 171.75 wind 7 43200 > th dose independent no NA NA
460 171.75 wind 7 43200 < th dose independent no NA NA
503 171.84 wind 7 43200 > th dose independent rect. 20 23
518 171.87 wind 7 43200 < th dose independent rect. 20 23
594 172.03 wind 7 43200 > th dose independent rect. 17 23
627 172.10 wind 7 43200 < th dose independent rect. 17 23
682 172.20 wind 9 43200 < th dose independent rect. 19 2
780 172.43 wind 5 43200 > th dose dependent no NA NA
790 172.46 wind 9 43200 > th dose independent rect. 19 2
810 172.49 wind 5 43200 > th dose dependent rect. 13 23
869 172.63 wind 5 43200 > th dose dependent rect. 19 23
913 172.73 wind 9 43200 < th dose dependent rect. 20 1
920 172.75 temperature 25 4320 < th dose independent rect. 3 10
924 172.75 wind 9 43200 > th dose dependent rect. 19 4
969 172.82 temperature 20 1440 > th dose dependent rect. 3 20
971 172.83 humidity 90 43200 > th dose independent rect. 22 1
972 172.83 wind 7 43200 < th dose independent rect. 17 4