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Os01g0533500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Callose synthase 1 catalytic subunit.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.54 (0.0196) R2 : 0.327
β1 : -0.962 (0.0719) R2dD : 0.274 R2D : 0.298
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.162 (0.0419) R2dN8 : 0.0294 R2N8 : 0.0529
σ : 0.368
deviance : 62.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.94 0.318 9.56 -0.967 0.396 0.238 0.582 0.154 0.0549 3.66 1006 376 -- --
46.06 0.316 9.56 -0.969 0.398 0.24 0.582 -- 0.0535 3.7 1006 389 -- --
46.91 0.319 9.56 -0.964 0.392 0.245 -- 0.156 0.0535 3.35 1006 376 -- --
47.01 0.319 9.57 -0.978 0.398 0.253 -- -- 0.041 3.36 1006 376 -- --
55.04 0.346 9.57 -0.959 -- 0.286 -- 0.18 0.0268 -- 1006 223 -- --
50.3 0.332 9.54 -0.972 0.431 -- 0.731 -- 0.154 4.09 -- -- -- --
51.73 0.337 9.54 -0.98 0.434 -- -- -- 0.15 3.75 -- -- -- --
55.2 0.346 9.57 -0.959 -- 0.291 -- -- 0.0319 -- 1006 214 -- --
72.13 0.396 9.55 -- 0.368 0.253 -- -- 0.148 3.36 1006 269 -- --
62.15 0.368 9.54 -0.962 -- -- -- -- 0.162 -- -- -- -- --
77.07 0.411 9.52 -- 0.415 -- -- -- 0.259 3.77 -- -- -- --
79.44 0.415 9.55 -- -- 0.295 -- -- 0.136 -- 1006 201 -- --
86.58 0.434 9.52 -- -- -- -- -- 0.268 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.34 temperature 30 270 < th dose independent rect. 3 16
2 45.59 temperature 10 30 > th dose dependent rect. 19 23
7 45.78 atmosphere 1005 270 > th dose independent rect. 3 16
10 45.86 atmosphere 1005 270 > th dose independent rect. 2 19
19 45.99 temperature 30 270 < th dose independent rect. 1 20
22 46.05 temperature 15 10 > th dose dependent rect. 6 23
50 46.50 humidity 70 90 > th dose independent rect. 17 15
52 46.51 temperature 20 30 > th dose independent rect. 19 23
53 46.52 humidity 70 270 > th dose independent rect. 15 16
72 46.66 atmosphere 1005 270 < th dose independent rect. 22 20
78 46.72 atmosphere 1005 270 > th dose independent rect. 12 23
81 46.73 temperature 10 270 > th dose dependent rect. 9 16
84 46.75 temperature 30 270 < th dose independent rect. 15 16
85 46.75 temperature 20 270 > th dose independent rect. 19 22
86 46.76 temperature 30 270 < th dose independent rect. 14 18
88 46.76 temperature 20 10 > th dose independent rect. 6 23
92 46.78 temperature 20 270 > th dose independent rect. 22 16
93 46.78 atmosphere 1005 30 > th dose independent rect. 3 21
102 46.80 atmosphere 1005 270 > th dose independent rect. 9 23
106 46.81 temperature 30 90 < th dose dependent rect. 18 17
128 46.88 humidity 70 10 > th dose independent rect. 18 14
135 46.89 temperature 20 270 > th dose independent rect. 5 22
136 46.89 wind 3 720 < th dose dependent rect. 23 2
142 46.91 radiation 30 720 < th dose independent rect. 17 16
144 46.91 wind 1 270 > th dose independent rect. 7 23
146 46.91 atmosphere 1005 270 > th dose independent rect. 20 23
155 46.93 temperature 30 270 < th dose independent rect. 14 7
156 46.93 humidity 70 90 > th dose independent rect. 15 8
157 46.93 atmosphere 1005 30 > th dose independent rect. 5 14
173 46.96 atmosphere 1005 270 > th dose independent no NA NA
179 46.98 temperature 20 270 > th dose independent rect. 21 12
182 46.98 temperature 30 30 < th dose dependent rect. 18 14
184 46.99 humidity 70 90 < th dose independent rect. 19 13
194 47.01 temperature 25 90 < th dose independent rect. 18 15
199 47.02 humidity 70 90 < th dose independent rect. 19 1
226 47.04 humidity 50 270 > th dose independent rect. 14 8
259 47.10 radiation 30 720 < th dose independent rect. 1 8
267 47.11 atmosphere 1005 270 > th dose independent rect. 7 23
270 47.12 wind 1 90 > th dose independent rect. 21 9
285 47.13 temperature 30 90 < th dose dependent sin 9 NA
297 47.16 atmosphere 1005 270 > th dose independent sin 22 NA
298 47.16 temperature 20 720 > th dose independent rect. 22 3
310 47.18 humidity 60 10 > th dose independent rect. 10 14
324 47.19 temperature 20 270 > th dose independent rect. 11 14
333 47.20 temperature 15 90 > th dose dependent rect. 22 23
335 47.21 wind 1 1440 > th dose independent rect. 23 1
336 47.21 temperature 30 270 < th dose independent rect. 14 5
339 47.21 atmosphere 1005 90 < th dose independent rect. 7 10
362 47.24 temperature 20 90 < th dose independent sin 10 NA
364 47.24 humidity 60 270 > th dose independent rect. 1 21
366 47.24 humidity 80 720 < th dose dependent rect. 20 2
367 47.24 atmosphere 1010 10 < th dose dependent rect. 6 12
393 47.26 temperature 25 90 < th dose dependent rect. 19 12
394 47.26 humidity 70 90 < th dose dependent rect. 19 13
397 47.27 temperature 20 90 > th dose independent sin 8 NA
404 47.27 atmosphere 1005 270 < th dose independent rect. 3 15
408 47.27 humidity 60 270 > th dose independent rect. 2 17
415 47.27 humidity 70 90 < th dose dependent rect. 19 1
434 47.28 atmosphere 1005 270 < th dose independent rect. 5 13
448 47.29 temperature 30 270 < th dose independent sin 0 NA
452 47.29 temperature 20 10 > th dose independent rect. 24 10
462 47.29 temperature 20 90 > th dose independent rect. 22 23
475 47.31 wind 1 10 > th dose independent rect. 22 8
486 47.31 wind 1 270 < th dose independent rect. 22 21
494 47.32 wind 1 1440 < th dose independent rect. 23 1
502 47.32 temperature 20 270 < th dose independent rect. 4 21
511 47.33 atmosphere 1005 270 > th dose independent rect. 14 5
528 47.34 atmosphere 1005 30 < th dose independent sin 0 NA
529 47.34 atmosphere 1005 270 < th dose independent sin 2 NA
530 47.34 humidity 60 270 > th dose independent rect. 10 12
561 47.35 temperature 10 90 > th dose dependent sin 8 NA
576 47.36 wind 1 270 < th dose independent rect. 22 17
610 47.38 temperature 20 10 > th dose independent sin 7 NA
613 47.38 temperature 20 10 < th dose independent rect. 20 12
623 47.38 temperature 20 90 < th dose independent rect. 11 21
666 47.40 temperature 20 10 < th dose independent sin 9 NA
669 47.40 humidity 70 10 > th dose independent rect. 16 8
686 47.40 temperature 20 720 > th dose independent rect. 6 19
703 47.40 temperature 30 90 < th dose dependent rect. 3 21
731 47.41 temperature 15 90 > th dose dependent rect. 23 18
736 47.41 temperature 25 90 < th dose dependent rect. 11 22
758 47.42 temperature 20 270 < th dose independent rect. 6 23
771 47.43 atmosphere 1005 270 > th dose independent rect. 15 3
786 47.43 temperature 20 720 < th dose independent rect. 7 18
789 47.43 temperature 20 10 > th dose independent rect. 23 19
800 47.43 atmosphere 1005 30 > th dose independent rect. 21 22
812 47.43 temperature 15 30 > th dose dependent rect. 11 23
816 47.44 temperature 20 720 > th dose independent rect. 19 6
846 47.44 humidity 50 270 > th dose dependent rect. 14 5
870 47.45 temperature 20 720 < th dose independent rect. 11 14
892 47.45 temperature 20 270 < th dose independent rect. 8 23
899 47.46 humidity 60 720 > th dose independent rect. 10 3
905 47.46 wind 1 270 > th dose independent rect. 19 10
907 47.46 wind 1 270 < th dose independent rect. 22 12
921 47.46 atmosphere 1005 270 < th dose independent rect. 5 23
922 47.46 humidity 50 10 > th dose dependent rect. 14 10
934 47.46 temperature 30 30 < th dose dependent rect. 1 23
935 47.47 temperature 20 270 > th dose independent no NA NA
938 47.47 temperature 20 270 < th dose independent no NA NA
942 47.47 atmosphere 1005 270 > th dose independent rect. 14 7