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Os01g0532900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Callose synthase 1 catalytic subunit.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.15 (0.0263) R2 : 0.832
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.29 (0.0693) R2dE : 0.826 R2E : 0.824
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.231 (0.0554) R2dN8 : 0.00844 R2N8 : 0.00617
σ : 0.495
deviance : 112.86
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_____
C
peak time of C : --
E
wheather : temperature
threshold : -0.6021
memory length : 300
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.72
open length of G : 8.83

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
102.05 0.475 7.14 0.115 0.948 -2.72 1.03 2.05 0.256 2.96 8.362 254 5.93 8.23
104.65 0.476 7.16 0.0394 0.9 -2.67 -0.0633 -- 0.203 3.52 4.615 282 5.5 8.37
103.17 0.473 7.12 0.158 0.939 -2.81 -- 1.45 0.274 3.48 8.184 267 5.53 8.42
104.52 0.476 7.15 0.0189 0.881 -2.71 -- -- 0.216 3.74 3.155 279 5.5 8.42
112.22 0.493 7.17 0.155 -- -3.26 -- 0.819 0.246 -- 1.133 283 5.7 9.08
166.65 0.605 7.2 -0.0714 2.85 -- 0.00399 -- 0.173 1.24 -- -- -- --
166.65 0.605 7.2 -0.0716 2.85 -- -- -- 0.173 1.24 -- -- -- --
112.76 0.495 7.15 0.0705 -- -3.31 -- -- 0.243 -- 0.1569 305 5.65 8.83
104.5 0.476 7.15 -- 0.86 -2.73 -- -- 0.217 3.69 3.438 279 5.52 8.46
668.15 1.21 7.16 0.0388 -- -- -- -- 0.231 -- -- -- -- --
166.78 0.604 7.2 -- 2.85 -- -- -- 0.181 1.24 -- -- -- --
112.86 0.495 7.15 -- -- -3.29 -- -- 0.231 -- -0.6021 300 5.72 8.83
668.19 1.21 7.16 -- -- -- -- -- 0.227 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 103.75 temperature 10.0 270 > th dose dependent rect. 6 8
10 113.88 temperature 20.0 270 > th dose independent rect. 6 8
19 116.58 humidity 50.0 270 > th dose independent rect. 6 8
25 118.08 wind 1.0 270 > th dose independent rect. 5 9
29 119.03 temperature 10.0 10 > th dose dependent rect. 8 7
35 119.62 wind 9.0 270 < th dose independent rect. 14 16
37 119.64 radiation 40.0 270 < th dose independent rect. 14 16
39 119.73 precipitation 0.1 270 < th dose independent rect. 6 8
40 119.73 precipitation 0.1 270 < th dose dependent rect. 6 8
41 119.81 radiation 1.0 270 > th dose independent rect. 5 9
54 120.04 atmosphere 995.0 270 > th dose independent rect. 6 8
55 120.04 atmosphere 1015.0 270 < th dose independent rect. 6 8
56 120.04 temperature 10.0 270 > th dose independent rect. 14 16
61 120.30 wind 9.0 270 < th dose independent rect. 6 8
65 120.74 precipitation 0.1 270 < th dose independent rect. 14 16
66 120.74 precipitation 0.1 270 < th dose dependent rect. 14 16
92 122.18 temperature 10.0 270 > th dose dependent rect. 19 18
125 123.56 atmosphere 995.0 270 > th dose independent rect. 14 16
131 123.73 radiation 10.0 270 < th dose independent rect. 18 8
133 123.73 precipitation 0.1 270 < th dose independent rect. 2 16
135 123.73 precipitation 0.1 270 < th dose dependent rect. 2 16
136 123.79 radiation 10.0 270 < th dose dependent rect. 18 8
139 123.81 atmosphere 995.0 270 > th dose independent rect. 18 8
145 123.87 temperature 10.0 270 > th dose independent rect. 18 8
146 123.87 humidity 50.0 270 > th dose independent rect. 18 8
150 123.87 temperature 10.0 270 > th dose independent rect. 2 16
151 123.87 atmosphere 1015.0 270 < th dose independent rect. 2 16
154 123.96 wind 9.0 270 < th dose independent rect. 2 16
155 124.00 wind 9.0 270 < th dose independent rect. 18 8
166 124.01 humidity 50.0 10 > th dose independent rect. 8 7
167 124.04 temperature 20.0 10 > th dose independent rect. 8 7
174 124.25 precipitation 0.1 270 < th dose independent rect. 18 8
176 124.25 precipitation 0.1 270 < th dose dependent rect. 18 8
209 125.19 temperature 30.0 270 < th dose independent rect. 19 7
233 125.43 radiation 40.0 90 < th dose dependent rect. 15 17
234 125.44 temperature 10.0 10 > th dose dependent rect. 21 18
241 125.61 humidity 50.0 10 > th dose independent rect. 21 18
255 126.02 radiation 1.0 270 < th dose dependent rect. 2 9
258 126.08 humidity 50.0 270 > th dose independent rect. 19 19
268 126.28 humidity 50.0 90 > th dose independent rect. 21 18
270 126.33 atmosphere 995.0 270 > th dose independent rect. 2 16
272 126.36 radiation 1.0 270 < th dose independent rect. 2 9
310 126.71 radiation 1.0 270 < th dose independent rect. 2 15
323 126.86 radiation 1.0 270 < th dose dependent rect. 2 15
378 127.30 humidity 50.0 270 > th dose independent rect. 14 16
391 127.54 wind 9.0 90 < th dose dependent rect. 3 16
396 127.59 humidity 60.0 270 > th dose dependent rect. 2 4
426 127.72 radiation 1.0 270 < th dose independent rect. 2 5
449 127.92 humidity 90.0 90 < th dose independent rect. 7 8
464 128.10 humidity 60.0 270 > th dose dependent rect. 3 2
478 128.21 wind 9.0 270 < th dose dependent rect. 2 4
491 128.40 wind 1.0 270 > th dose independent rect. 19 7
503 128.54 precipitation 0.1 270 < th dose independent rect. 13 6
504 128.54 precipitation 0.1 270 < th dose dependent rect. 13 6
508 128.58 precipitation 0.1 270 < th dose independent rect. 19 18
509 128.58 precipitation 0.1 270 < th dose dependent rect. 19 18
516 128.64 atmosphere 1015.0 90 < th dose dependent rect. 8 7
525 128.73 wind 9.0 270 < th dose independent rect. 13 6
529 128.75 wind 7.0 270 < th dose independent rect. 2 4
531 128.77 atmosphere 995.0 10 > th dose independent rect. 15 17
534 128.81 temperature 10.0 270 > th dose dependent rect. 2 4
548 128.84 radiation 1.0 270 < th dose dependent rect. 3 2
557 128.86 temperature 10.0 270 > th dose independent rect. 2 4
559 128.86 temperature 30.0 270 < th dose independent rect. 2 4
560 128.86 humidity 50.0 270 > th dose independent rect. 2 4
563 128.86 atmosphere 995.0 270 > th dose independent rect. 2 4
564 128.86 atmosphere 1015.0 270 < th dose independent rect. 2 4
565 128.86 radiation 20.0 270 < th dose independent rect. 2 4
568 128.86 temperature 10.0 270 > th dose independent rect. 6 20
569 128.86 radiation 30.0 270 < th dose dependent rect. 2 4
572 128.87 humidity 80.0 270 > th dose independent rect. 3 2
585 128.95 atmosphere 995.0 270 > th dose dependent rect. 13 6
597 129.02 temperature 10.0 270 > th dose independent rect. 13 6
599 129.02 atmosphere 1010.0 270 < th dose independent rect. 13 6
601 129.02 temperature 10.0 270 > th dose independent rect. 19 18
602 129.02 atmosphere 995.0 270 > th dose independent rect. 19 18
605 129.04 wind 7.0 270 < th dose independent rect. 3 2
612 129.08 temperature 10.0 270 > th dose independent rect. 3 2
614 129.08 temperature 30.0 270 < th dose independent rect. 3 2
615 129.08 humidity 50.0 270 > th dose independent rect. 3 2
618 129.08 atmosphere 995.0 270 > th dose independent rect. 3 2
619 129.08 atmosphere 1010.0 270 < th dose independent rect. 3 2
621 129.08 radiation 20.0 270 < th dose independent rect. 3 2
624 129.08 temperature 10.0 270 > th dose independent rect. 5 22
632 129.11 radiation 1.0 270 < th dose independent rect. 3 2
635 129.11 wind 1.0 270 > th dose independent rect. 6 19
636 129.11 wind 1.0 270 > th dose independent rect. 19 19
638 129.13 wind 9.0 270 < th dose independent rect. 19 18
641 129.15 temperature 10.0 10 > th dose independent rect. 8 7
643 129.15 atmosphere 995.0 10 > th dose independent rect. 8 7
644 129.15 atmosphere 1015.0 10 < th dose independent rect. 8 7
645 129.15 precipitation 0.1 10 < th dose independent rect. 8 7
646 129.15 temperature 10.0 10 > th dose independent rect. 15 17
647 129.15 precipitation 0.1 10 < th dose dependent rect. 8 7
649 129.17 wind 9.0 10 < th dose independent rect. 15 17
655 129.22 temperature 10.0 10 > th dose dependent rect. 8 19
656 129.24 wind 9.0 270 < th dose dependent rect. 3 2
661 129.26 precipitation 0.1 270 < th dose independent rect. 2 4
663 129.26 precipitation 0.1 270 < th dose dependent rect. 2 4
675 129.31 radiation 1.0 270 > th dose independent sin 3 NA
680 129.33 radiation 1.0 270 < th dose dependent sin 3 NA
695 129.37 wind 1.0 90 > th dose independent rect. 15 6
697 129.37 humidity 50.0 270 > th dose dependent rect. 19 6
704 129.39 atmosphere 1015.0 10 < th dose dependent rect. 8 7
714 129.42 radiation 40.0 10 < th dose independent rect. 15 17
716 129.42 temperature 10.0 270 > th dose dependent rect. 3 2
745 129.51 wind 9.0 10 < th dose independent rect. 8 7
750 129.57 temperature 10.0 90 > th dose dependent rect. 8 19
756 129.58 temperature 10.0 90 > th dose independent rect. 21 18
760 129.61 radiation 1.0 270 < th dose independent sin 3 NA
768 129.63 wind 9.0 270 < th dose independent rect. 6 20
797 129.69 radiation 30.0 90 < th dose independent rect. 14 7
805 129.73 atmosphere 995.0 90 > th dose dependent rect. 3 17
814 129.80 wind 9.0 90 < th dose independent rect. 21 18
849 129.92 temperature 10.0 1440 > th dose independent rect. 9 7
852 129.92 temperature 10.0 1440 > th dose independent rect. 16 17
868 129.97 atmosphere 1015.0 270 < th dose independent rect. 19 6
869 129.97 humidity 50.0 10 > th dose independent rect. 15 17
893 130.10 atmosphere 1015.0 270 < th dose independent rect. 14 16
914 130.22 atmosphere 995.0 90 > th dose independent rect. 15 6
919 130.26 precipitation 0.1 270 < th dose independent rect. 6 20
921 130.26 precipitation 0.1 270 < th dose dependent rect. 6 20
947 130.40 wind 1.0 90 > th dose independent rect. 21 18
950 130.45 radiation 40.0 270 < th dose independent rect. 14 4
970 130.50 wind 1.0 270 > th dose independent rect. 14 15