Os01g0532300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0532300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.38 | 0.681 | 12.9 | -0.282 | 1.88 | -3.24 | 1.1 | 3.89 | 0.273 | 19.8 | 1.227 | 83 | 4.02 | 0.965 |
| 209.11 | 0.673 | 12.9 | -0.395 | 1.91 | -3.01 | 1.37 | -- | 0.304 | 19.7 | 1.817 | 74 | 4.22 | 0.867 |
| 212.69 | 0.679 | 13 | -0.439 | 1.84 | -3.13 | -- | 0.218 | 0.242 | 19.8 | 1.682 | 77 | 4.2 | 0.837 |
| 212.26 | 0.679 | 12.9 | -0.461 | 1.84 | -3.1 | -- | -- | 0.275 | 19.8 | 1.732 | 75 | 4.22 | 0.878 |
| 334.65 | 0.852 | 12.9 | -0.511 | -- | -2.71 | -- | 0.247 | 0.345 | -- | 3.588 | 328 | 4.09 | 0.817 |
| 301.17 | 0.814 | 12.9 | -0.58 | 2.26 | -- | 2.12 | -- | 0.4 | 19.2 | -- | -- | -- | -- |
| 313.05 | 0.829 | 12.9 | -0.627 | 2.26 | -- | -- | -- | 0.403 | 19.3 | -- | -- | -- | -- |
| 295.85 | 0.801 | 12.9 | -0.464 | -- | -2.37 | -- | -- | 0.42 | -- | 4.761 | 467 | 3.91 | 0.65 |
| 218.07 | 0.688 | 12.9 | -- | 1.85 | -3.13 | -- | -- | 0.309 | 19.8 | 1.664 | 76 | 4.22 | 0.867 |
| 585.42 | 1.13 | 12.9 | -0.665 | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
| 323.41 | 0.841 | 12.9 | -- | 2.27 | -- | -- | -- | 0.473 | 19.3 | -- | -- | -- | -- |
| 301 | 0.808 | 12.9 | -- | -- | -2.44 | -- | -- | 0.328 | -- | 4.404 | 468 | 3.9 | 0.638 |
| 597.1 | 1.14 | 12.9 | -- | -- | -- | -- | -- | 0.439 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.33 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 2 | 213.24 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 3 | 218.65 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 5 | 220.51 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 10 | 224.50 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 13 | 226.94 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 17 | 229.30 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 24 | 231.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 26 | 231.16 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 27 | 231.16 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 28 | 231.24 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 30 | 231.30 | wind | 5.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 35 | 231.32 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 38 | 231.32 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 41 | 231.32 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 42 | 231.32 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 47 | 231.32 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 48 | 231.78 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 56 | 233.83 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 62 | 234.61 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 63 | 234.61 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 69 | 235.24 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 10 |
| 75 | 237.82 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 81 | 239.13 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 19 |
| 83 | 239.76 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 87 | 240.46 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 94 | 241.13 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 10 |
| 99 | 242.23 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 103 | 243.05 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 127 | 244.29 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 129 | 244.29 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 132 | 244.29 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 136 | 244.29 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 145 | 244.29 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 146 | 244.29 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 156 | 244.29 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 168 | 245.79 | wind | 9.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 170 | 245.97 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 173 | 246.22 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 198 | 247.11 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 203 | 247.87 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 219 | 248.20 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 238 | 248.91 | radiation | 10.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 240 | 248.98 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 266 | 249.21 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 23 |
| 267 | 249.21 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 271 | 249.35 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 272 | 249.44 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 350 | 250.94 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 1 | 16 |
| 359 | 251.09 | wind | 1.0 | 30 | > th | dose independent | sin | 4 | NA |
| 383 | 251.64 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 406 | 251.73 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 409 | 251.74 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 15 |
| 459 | 252.36 | wind | 3.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 461 | 252.39 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 462 | 252.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 474 | 252.53 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 7 |
| 486 | 252.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 12 |
| 488 | 252.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 491 | 252.65 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 22 |
| 508 | 252.79 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 11 |
| 509 | 252.79 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 11 |
| 515 | 252.85 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 12 | 16 |
| 531 | 252.94 | wind | 9.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 541 | 253.02 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 13 |
| 542 | 253.02 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 13 |
| 595 | 253.52 | wind | 3.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 596 | 253.53 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 619 | 253.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 637 | 253.73 | wind | 5.0 | 43200 | < th | dose independent | rect. | 1 | 17 |
| 644 | 253.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 648 | 253.81 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 667 | 253.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 707 | 254.14 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 771 | 254.37 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 10 |
| 797 | 254.48 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 805 | 254.52 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 19 |
| 811 | 254.56 | wind | 3.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 873 | 254.80 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 903 | 255.00 | wind | 5.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 943 | 255.16 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 999 | 255.43 | wind | 3.0 | 43200 | > th | dose dependent | no | NA | NA |