Os01g0531000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0531000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.08 | 0.458 | 7.92 | -0.939 | 0.24 | 0.806 | -0.802 | -0.296 | -0.451 | 7.34 | 19.46 | 4474 | -- | -- |
| 95.09 | 0.454 | 7.91 | -0.88 | 0.238 | 0.831 | -0.802 | -- | -0.435 | 7.35 | 18.49 | 4449 | -- | -- |
| 96.66 | 0.458 | 7.93 | -0.985 | 0.235 | 0.805 | -- | -0.369 | -0.461 | 7.99 | 18.9 | 4368 | -- | -- |
| 96.64 | 0.458 | 7.91 | -0.902 | 0.238 | 0.846 | -- | -- | -0.435 | 8.36 | 18.21 | 4364 | -- | -- |
| 99.74 | 0.465 | 7.93 | -0.978 | -- | 0.833 | -- | -0.302 | -0.455 | -- | 18.3 | 4377 | -- | -- |
| 111.26 | 0.495 | 7.87 | -0.485 | 0.244 | -- | -0.853 | -- | -0.259 | 7.11 | -- | -- | -- | -- |
| 113.1 | 0.498 | 7.87 | -0.501 | 0.242 | -- | -- | -- | -0.256 | 7.7 | -- | -- | -- | -- |
| 99.77 | 0.465 | 7.92 | -0.902 | -- | 0.847 | -- | -- | -0.434 | -- | 18.1 | 4377 | -- | -- |
| 111.7 | 0.495 | 7.88 | -- | 0.395 | 0.687 | -- | -- | -0.289 | 5.08 | 22.86 | 4599 | -- | -- |
| 116.27 | 0.504 | 7.88 | -0.497 | -- | -- | -- | -- | -0.253 | -- | -- | -- | -- | -- |
| 119.7 | 0.512 | 7.86 | -- | 0.239 | -- | -- | -- | -0.201 | 7.84 | -- | -- | -- | -- |
| 114.37 | 0.498 | 7.86 | -- | -- | 0.497 | -- | -- | -0.195 | -- | 25.5 | 4554 | -- | -- |
| 122.79 | 0.517 | 7.86 | -- | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.72 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 92.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 3 | 92.96 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 8 | 93.20 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 14 | 93.41 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 24 | 93.67 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 28 | 93.82 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 30 | 93.83 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 34 | 93.86 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 35 | 93.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 37 | 93.91 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 39 | 93.92 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 40 | 93.92 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 43 | 93.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 45 | 93.96 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 47 | 93.98 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 52 | 94.00 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 6 |
| 55 | 94.01 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 66 | 94.05 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 96 | 94.11 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 190 | 94.30 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 15 |
| 283 | 94.44 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 311 | 94.48 | temperature | 30 | 4320 | < th | dose dependent | sin | 14 | NA |
| 325 | 94.51 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 354 | 94.55 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 360 | 94.56 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 397 | 94.59 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 431 | 94.62 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 469 | 94.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 689 | 94.89 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 722 | 94.91 | temperature | 25 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 775 | 94.96 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 842 | 95.01 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 2 |
| 923 | 95.06 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 21 |
| 953 | 95.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |