Os01g0530100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0530100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162 | 0.598 | 5.98 | 0.717 | 2.16 | -1.12 | -1.13 | -1.44 | -0.253 | 12.9 | 21.63 | 1213 | -- | -- |
| 166.95 | 0.602 | 5.95 | 1.11 | 2.13 | -1.01 | -0.993 | -- | -0.176 | 12.8 | 21.79 | 1211 | -- | -- |
| 167.01 | 0.602 | 5.97 | 0.744 | 2.17 | -1.13 | -- | -1.22 | -0.242 | 12.8 | 21.6 | 1261 | -- | -- |
| 170.43 | 0.608 | 5.93 | 1.08 | 2.14 | -1.05 | -- | -- | -0.168 | 12.9 | 21.67 | 1192 | -- | -- |
| 436.49 | 0.973 | 5.98 | 0.891 | -- | -1.62 | -- | -1.09 | -0.142 | -- | 21.44 | 957 | -- | -- |
| 202.76 | 0.668 | 6 | 0.693 | 2.25 | -- | -1.01 | -- | -0.476 | 12.9 | -- | -- | -- | -- |
| 207.05 | 0.674 | 6 | 0.655 | 2.26 | -- | -- | -- | -0.482 | 12.8 | -- | -- | -- | -- |
| 396.58 | 0.927 | 5.9 | 0.956 | -- | -1.75 | -- | -- | 0.0726 | -- | 25 | 967 | -- | -- |
| 196.98 | 0.654 | 5.96 | -- | 2.16 | -0.802 | -- | -- | -0.267 | 12.8 | 22 | 1155 | -- | -- |
| 524.46 | 1.07 | 6.04 | 0.572 | -- | -- | -- | -- | -0.524 | -- | -- | -- | -- | -- |
| 218.37 | 0.691 | 6.02 | -- | 2.24 | -- | -- | -- | -0.555 | 12.8 | -- | -- | -- | -- |
| 427.92 | 0.963 | 5.94 | -- | -- | -1.59 | -- | -- | -0.0687 | -- | 24.93 | 952 | -- | -- |
| 533.1 | 1.08 | 6.06 | -- | -- | -- | -- | -- | -0.587 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 9 | 165.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 20 |
| 30 | 166.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 13 |
| 38 | 166.45 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 59 | 166.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 63 | 166.81 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 100 | 167.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 162 | 168.02 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 180 | 168.25 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 201 | 168.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 204 | 168.40 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 273 | 168.86 | temperature | 25 | 720 | < th | dose dependent | sin | 2 | NA |
| 275 | 168.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 3 |
| 296 | 168.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 399 | 169.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 479 | 169.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 503 | 169.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 690 | 170.58 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 724 | 170.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 14 |
| 777 | 170.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 11 |
| 815 | 171.03 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 834 | 171.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 13 |
| 859 | 171.15 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 893 | 171.24 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 976 | 171.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 982 | 171.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 989 | 171.44 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 2 |