Os01g0529800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Very-long-chain fatty acid condensing enzyme CUT1.
FiT-DB / Search/ Help/ Sample detail
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Os01g0529800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Very-long-chain fatty acid condensing enzyme CUT1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 508.67 | 1.06 | 7.21 | 4.66 | 2.08 | -4.93 | 0.667 | -12.8 | 1.41 | 6.04 | 0.926 | 4370 | 21.5 | -- |
| 613.68 | 1.15 | 7.5 | 3.95 | 1.77 | -1.77 | 0.131 | -- | 1.41 | 6.28 | 46.18 | 4214 | 20.2 | -- |
| 509.73 | 1.05 | 7.21 | 4.66 | 2.08 | -4.95 | -- | -12.9 | 1.41 | 6.04 | 0.926 | 4371 | 21.4 | -- |
| 608.61 | 1.15 | 7.48 | 3.97 | 1.87 | -2.07 | -- | -- | 1.39 | 5.84 | 49.33 | 4118 | 15.8 | -- |
| 696.78 | 1.23 | 7.21 | 4.81 | -- | -4.89 | -- | -13 | 1.51 | -- | 0.79 | 4300 | 21.6 | -- |
| 681.32 | 1.22 | 7.46 | 3.85 | 1.93 | -- | 0.302 | -- | 1.58 | 6.16 | -- | -- | -- | -- |
| 681.55 | 1.22 | 7.46 | 3.86 | 1.93 | -- | -- | -- | 1.58 | 6.16 | -- | -- | -- | -- |
| 621.61 | 1.16 | 7.56 | 4.01 | -- | -3.45 | -- | -- | 1.28 | -- | 157.6 | 4754 | 15.6 | -- |
| 888.43 | 1.39 | 7.47 | -- | 1.47 | -2.33 | -- | -- | 1.21 | 6.03 | 0.005276 | 4314 | 15.7 | -- |
| 874.25 | 1.38 | 7.49 | 3.91 | -- | -- | -- | -- | 1.62 | -- | -- | -- | -- | -- |
| 1073.61 | 1.53 | 7.55 | -- | 1.98 | -- | -- | -- | 1.15 | 6.06 | -- | -- | -- | -- |
| 815.06 | 1.33 | 7.46 | -- | -- | -3.27 | -- | -- | 1.08 | -- | 0.02002 | 46060 | 18.7 | -- |
| 1277.66 | 1.67 | 7.59 | -- | -- | -- | -- | -- | 1.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 488.65 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 16 |
| 2 | 489.64 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 5 | 492.04 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 11 | 14 |
| 6 | 492.75 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 15 | 496.13 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 33 | 499.03 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 38 | 499.73 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 17 |
| 55 | 501.05 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 57 | 501.13 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 17 |
| 59 | 501.22 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 63 | 501.59 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 15 |
| 64 | 501.62 | humidity | 80.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 75 | 502.65 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 86 | 503.27 | humidity | 80.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 87 | 503.28 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 89 | 503.51 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 22 | 21 |
| 116 | 504.63 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 118 | 504.71 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 148 | 505.56 | humidity | 70.0 | 43200 | > th | dose dependent | no | NA | NA |
| 162 | 506.33 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 184 | 507.35 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 191 | 507.73 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 205 | 507.98 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 208 | 508.04 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 20 |
| 211 | 508.12 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 213 | 508.21 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 228 | 508.64 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 15 |
| 287 | 510.23 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 21 | NA |
| 293 | 510.37 | humidity | 80.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 317 | 511.03 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 327 | 511.28 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 360 | 512.06 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 393 | 512.75 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 399 | 512.81 | humidity | 80.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 411 | 513.07 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 7 |
| 413 | 513.12 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 418 | 513.22 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 422 | 513.27 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 443 | 513.75 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 465 | 514.22 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 490 | 514.95 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 494 | 514.98 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 15 |
| 497 | 515.04 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 20 | 20 |
| 559 | 516.09 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 587 | 516.40 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 701 | 517.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 703 | 517.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 713 | 518.01 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 714 | 518.05 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 750 | 518.51 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 809 | 519.50 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 3 | NA |
| 870 | 520.23 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 22 |
| 979 | 521.74 | temperature | 20.0 | 43200 | < th | dose dependent | no | NA | NA |
| 997 | 521.95 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 1 |