Os01g0525000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0525000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.27 | 0.542 | 2.81 | -0.141 | 0.116 | 0.237 | -1.39 | -1.02 | -0.0113 | 16.5 | 3 | 10 | -- | -- |
| 138.83 | 0.553 | 2.79 | -0.131 | 0.0464 | 0.187 | -0.737 | -- | 0.00678 | 16.6 | 3 | 10 | -- | -- |
| 138.91 | 0.549 | 2.8 | -0.133 | 0.0501 | 0.194 | -- | -0.524 | -0.0134 | 17.3 | 2.9 | 10 | -- | -- |
| 139.78 | 0.554 | 2.79 | -0.127 | 0.0894 | 0.154 | -- | -- | 0.00557 | 21.8 | 3 | 10 | -- | -- |
| 139.04 | 0.549 | 2.8 | -0.129 | -- | 0.158 | -- | -0.538 | 0.000816 | -- | 2.878 | 10 | -- | -- |
| 140.25 | 0.555 | 2.79 | -0.068 | 0.149 | -- | 0.508 | -- | 0.0215 | 2.61 | -- | -- | -- | -- |
| 141.08 | 0.556 | 2.79 | -0.0807 | 0.152 | -- | -- | -- | 0.0189 | 1.65 | -- | -- | -- | -- |
| 140.26 | 0.554 | 2.79 | -0.126 | -- | 0.155 | -- | -- | 0.00543 | -- | 3 | 10 | -- | -- |
| 140.19 | 0.554 | 2.79 | -- | 0.0889 | 0.136 | -- | -- | 0.0207 | 22.3 | 3 | 10 | -- | -- |
| 142.48 | 0.558 | 2.79 | -0.0745 | -- | -- | -- | -- | 0.0223 | -- | -- | -- | -- | -- |
| 141.25 | 0.556 | 2.79 | -- | 0.15 | -- | -- | -- | 0.0279 | 1.63 | -- | -- | -- | -- |
| 140.67 | 0.554 | 2.79 | -- | -- | 0.143 | -- | -- | 0.0203 | -- | 3 | 10 | -- | -- |
| 142.63 | 0.557 | 2.78 | -- | -- | -- | -- | -- | 0.0306 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.37 | humidity | 60 | 10 | < th | dose independent | rect. | 14 | 1 |
| 11 | 123.20 | wind | 3 | 10 | < th | dose independent | rect. | 13 | 1 |
| 16 | 123.88 | wind | 3 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 19 | 124.14 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 21 | 124.20 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 44 | 126.49 | radiation | 40 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 64 | 126.96 | radiation | 40 | 10 | > th | dose independent | rect. | 13 | 1 |
| 67 | 127.28 | radiation | 40 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 90 | 127.68 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 13 | 1 |
| 101 | 127.84 | wind | 3 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 107 | 127.96 | humidity | 70 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 147 | 129.64 | wind | 3 | 10 | < th | dose independent | rect. | 13 | 7 |
| 180 | 130.64 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 12 | 8 |
| 276 | 131.67 | radiation | 10 | 30 | > th | dose independent | rect. | 13 | 1 |
| 277 | 131.71 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 281 | 131.76 | radiation | 10 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 290 | 131.87 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 10 | 4 |
| 300 | 131.97 | wind | 9 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 334 | 132.12 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 12 | 5 |
| 357 | 132.34 | wind | 1 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 360 | 132.40 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 12 | 8 |
| 378 | 132.64 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 10 | 9 |
| 382 | 132.65 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 12 | 5 |
| 386 | 132.70 | wind | 3 | 10 | < th | dose independent | rect. | 13 | 19 |
| 408 | 132.93 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 14 | 7 |
| 410 | 132.94 | wind | 5 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 430 | 133.10 | wind | 5 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 437 | 133.12 | radiation | 40 | 90 | > th | dose dependent | sin | 13 | NA |
| 441 | 133.14 | humidity | 90 | 90 | < th | dose independent | rect. | 22 | 2 |
| 447 | 133.18 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 4 |
| 450 | 133.19 | atmosphere | 1010 | 720 | > th | dose independent | rect. | 13 | 1 |
| 458 | 133.19 | atmosphere | 1010 | 10 | > th | dose independent | rect. | 23 | 1 |
| 744 | 133.21 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 4 |
| 745 | 133.22 | atmosphere | 1010 | 10 | > th | dose independent | sin | 13 | NA |
| 767 | 133.24 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 10 | 10 |
| 770 | 133.26 | wind | 3 | 10 | < th | dose independent | sin | 19 | NA |
| 813 | 133.36 | wind | 3 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 814 | 133.37 | temperature | 25 | 30 | > th | dose independent | rect. | 13 | 1 |
| 817 | 133.37 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 875 | 133.46 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 12 | 19 |
| 883 | 133.50 | wind | 3 | 10 | > th | dose independent | rect. | 8 | 15 |
| 892 | 133.54 | humidity | 90 | 1440 | < th | dose independent | rect. | 4 | 16 |
| 898 | 133.55 | wind | 3 | 10 | < th | dose independent | rect. | 10 | 22 |
| 942 | 133.63 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 9 | 20 |
| 944 | 133.63 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 12 | 17 |