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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0524400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.2 (0.0526) R2 : 0.223
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.4 (0.132) R2dE : 0.241 R2E : 0.221
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.113 (0.121) R2dN8 : 0.00242 R2N8 : -0.0176
σ : 0.961
deviance : 425.39
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 23.69
memory length : 1111
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
411.2 0.953 4.17 0.0705 0.456 1.48 -0.642 -1.11 0.0904 9.98 24.2 1520 -- --
413.12 0.947 4.2 -0.269 0.491 1.38 -0.405 -- 0.0442 9.65 23.8 1533 -- --
412.53 0.946 4.17 0.0421 0.472 1.49 -- -1.11 0.0888 9.39 24.2 1520 -- --
413.99 0.948 4.21 -0.345 0.471 1.36 -- -- -0.00993 9.37 23.9 1527 -- --
419.34 0.954 4.16 0.0944 -- 1.41 -- -1.13 0.193 -- 23.6 1111 -- --
491.93 1.04 4.34 -0.882 0.462 -- -0.724 -- -0.574 10.4 -- -- -- --
493.8 1.04 4.34 -0.913 0.476 -- -- -- -0.578 9.86 -- -- -- --
421.88 0.957 4.2 -0.326 -- 1.35 -- -- 0.082 -- 23.7 1116 -- --
416.99 0.951 4.19 -- 0.469 1.43 -- -- 0.08 9.39 23.8 1532 -- --
507.36 1.05 4.35 -0.918 -- -- -- -- -0.577 -- -- -- -- --
515.78 1.06 4.32 -- 0.479 -- -- -- -0.476 10 -- -- -- --
425.39 0.961 4.2 -- -- 1.4 -- -- 0.113 -- 23.69 1111 -- --
529.61 1.07 4.33 -- -- -- -- -- -0.476 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 407.28 humidity 60 43200 < th dose independent rect. 11 1
2 409.14 wind 5 43200 > th dose dependent rect. 14 1
3 409.69 radiation 20 43200 < th dose independent rect. 7 1
6 410.71 radiation 1 14400 < th dose dependent rect. 4 1
8 410.73 radiation 20 43200 < th dose independent rect. 3 6
11 410.73 radiation 20 43200 < th dose independent rect. 19 14
14 410.74 radiation 20 43200 < th dose independent rect. 22 11
21 411.02 humidity 60 43200 > th dose independent rect. 10 2
56 412.78 radiation 20 43200 < th dose independent sin 10 NA
59 413.02 humidity 60 43200 < th dose independent rect. 21 16
64 413.16 radiation 10 43200 > th dose dependent rect. 7 1
69 413.46 humidity 60 43200 > th dose independent rect. 23 13
81 413.65 radiation 20 43200 > th dose independent rect. 17 15
82 413.67 radiation 20 43200 > th dose independent rect. 6 2
96 413.71 humidity 70 43200 < th dose dependent rect. 23 13
97 413.75 humidity 70 43200 < th dose dependent rect. 10 1
117 414.06 humidity 70 43200 < th dose dependent rect. 7 5
137 414.21 radiation 40 43200 < th dose independent rect. 9 2
138 414.22 humidity 60 43200 < th dose independent rect. 8 5
163 414.30 radiation 40 43200 < th dose independent rect. 7 4
165 414.33 radiation 40 43200 < th dose independent rect. 2 9
166 414.33 radiation 40 43200 < th dose independent rect. 18 17
175 414.35 radiation 40 43200 < th dose independent rect. 23 12
182 414.40 radiation 40 43200 < th dose independent rect. 14 1
188 414.52 radiation 10 43200 > th dose dependent rect. 17 15
255 414.85 radiation 40 43200 < th dose independent rect. 14 21
260 414.89 temperature 25 1440 < th dose independent rect. 5 18
276 414.97 radiation 40 43200 > th dose dependent rect. 10 1
279 415.01 radiation 40 43200 < th dose dependent rect. 7 1
281 415.07 radiation 40 43200 > th dose dependent rect. 7 4
297 415.08 radiation 40 43200 > th dose dependent rect. 14 21
311 415.32 radiation 40 43200 < th dose independent rect. 9 23
351 415.49 radiation 20 43200 > th dose dependent rect. 16 18
353 415.50 radiation 40 43200 < th dose independent sin 17 NA
355 415.51 radiation 40 43200 < th dose independent rect. 9 11
375 415.52 radiation 40 43200 < th dose independent rect. 9 8
431 415.71 radiation 40 43200 < th dose independent sin 9 NA
454 415.78 radiation 40 43200 < th dose independent rect. 7 13
462 415.79 radiation 40 43200 < th dose independent rect. 13 8
464 415.79 radiation 40 43200 < th dose independent rect. 7 10
471 415.79 radiation 40 43200 < th dose independent rect. 4 15
474 415.79 radiation 40 43200 < th dose independent rect. 2 16
514 415.79 radiation 40 43200 < th dose independent rect. 22 23
517 415.80 radiation 40 43200 < th dose independent no NA NA
573 415.81 radiation 40 43200 < th dose independent rect. 13 5
576 415.81 radiation 40 43200 < th dose independent rect. 13 15
580 415.82 radiation 40 43200 < th dose independent rect. 13 3
742 416.17 humidity 60 43200 < th dose independent sin 8 NA
760 416.23 radiation 40 43200 > th dose independent rect. 10 1
761 416.23 radiation 20 43200 < th dose independent rect. 14 2
766 416.24 temperature 25 1440 < th dose independent rect. 14 9
782 416.25 radiation 40 43200 > th dose dependent sin 10 NA
802 416.30 radiation 20 43200 > th dose dependent sin 11 NA
841 416.35 temperature 25 1440 > th dose independent rect. 5 18
884 416.45 temperature 25 1440 > th dose independent rect. 14 9
896 416.49 radiation 40 43200 < th dose dependent rect. 2 6
904 416.51 radiation 40 43200 < th dose dependent rect. 19 13
913 416.54 radiation 40 43200 < th dose dependent rect. 23 9
978 416.67 radiation 40 43200 > th dose dependent rect. 10 22
982 416.69 radiation 40 43200 > th dose dependent rect. 10 6