Os01g0524100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0524100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.55 | 0.596 | -820 | 5030 | 0.0732 | -241000 | 0.3 | 1470000 | 0.0534 | 12 | 995 | 10 | -- | -- |
| 157.57 | 0.589 | 2.89 | -0.113 | 0.067 | 4.75 | 0.297 | -- | 0.0515 | 12.5 | 994.8 | 17 | -- | -- |
| 163.93 | 0.596 | -820 | 5030 | 0.0736 | -241000 | -- | 1470000 | 0.0543 | 11.2 | 995 | 10 | -- | -- |
| 157.94 | 0.589 | 2.89 | -0.102 | 0.0672 | 4.77 | -- | -- | 0.0527 | 11.7 | 994.8 | 17 | -- | -- |
| 164.27 | 0.597 | -820 | 5030 | -- | -241000 | -- | 1470000 | 0.0543 | -- | 995 | 10 | -- | -- |
| 179.85 | 0.629 | 2.9 | -0.0874 | 0.0922 | -- | 0.4 | -- | 0.0412 | 14 | -- | -- | -- | -- |
| 180.46 | 0.629 | 2.89 | -0.0755 | 0.0924 | -- | -- | -- | 0.0434 | 13.6 | -- | -- | -- | -- |
| 158.22 | 0.588 | 2.89 | -0.104 | -- | 4.78 | -- | -- | 0.0519 | -- | 994.8 | 17 | -- | -- |
| 158.22 | 0.589 | 2.89 | -- | 0.0685 | 4.75 | -- | -- | 0.0641 | 11.8 | 994.8 | 17 | -- | -- |
| 180.98 | 0.629 | 2.89 | -0.0792 | -- | -- | -- | -- | 0.0413 | -- | -- | -- | -- | -- |
| 180.61 | 0.629 | 2.89 | -- | 0.0937 | -- | -- | -- | 0.0518 | 13.6 | -- | -- | -- | -- |
| 158.51 | 0.588 | 2.89 | -- | -- | 4.76 | -- | -- | 0.0635 | -- | 994.8 | 17 | -- | -- |
| 181.15 | 0.628 | 2.89 | -- | -- | -- | -- | -- | 0.0501 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.55 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 6 | 158.13 | atmosphere | 995 | 10 | < th | dose independent | sin | 6 | NA |
| 7 | 158.13 | atmosphere | 995 | 10 | < th | dose dependent | sin | 6 | NA |
| 8 | 158.14 | atmosphere | 995 | 30 | < th | dose dependent | rect. | 18 | 23 |
| 11 | 158.17 | atmosphere | 995 | 90 | < th | dose independent | rect. | 18 | 22 |
| 15 | 158.19 | atmosphere | 995 | 90 | < th | dose independent | rect. | 14 | 1 |
| 16 | 158.19 | atmosphere | 995 | 10 | < th | dose independent | rect. | 15 | 1 |
| 143 | 158.19 | atmosphere | 995 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 144 | 158.19 | atmosphere | 995 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 303 | 159.88 | temperature | 30 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 487 | 164.20 | atmosphere | 995 | 10 | < th | dose dependent | no | NA | NA |
| 698 | 164.21 | temperature | 30 | 10 | > th | dose dependent | sin | 12 | NA |
| 718 | 165.67 | atmosphere | 995 | 10 | > th | dose independent | rect. | 13 | 23 |
| 753 | 166.85 | atmosphere | 995 | 30 | > th | dose independent | rect. | 23 | 23 |
| 770 | 167.86 | temperature | 30 | 10 | > th | dose independent | rect. | 15 | 2 |
| 778 | 168.13 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 5 | 10 |
| 796 | 168.20 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 853 | 168.81 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 14 | 1 |