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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0521300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0264) R2 : 0.0105
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.122 (0.0555) R2dN8 : 0.0135 R2N8 : 0.0105
σ : 0.497
deviance : 113.3
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
109.98 0.493 2.99 -0.254 0.103 0.538 -0.305 -0.729 0.136 21.9 0.5512 685 -- --
110.15 0.489 2.99 -0.251 0.108 0.516 -0.242 -- 0.132 21.8 0.5197 703 -- --
110.28 0.489 2.99 -0.248 0.112 0.565 -- -0.469 0.139 21.5 0.4818 692 -- --
110.35 0.489 2.98 -0.243 0.112 0.542 -- -- 0.138 21.4 0.4912 703 -- --
110.92 0.491 2.98 -0.274 -- 0.493 -- -0.356 0.139 -- 0.1014 893 -- --
111.83 0.496 2.99 -0.2 0.0492 -- -0.309 -- 0.1 22.3 -- -- -- --
112.2 0.496 2.99 -0.188 0.0533 -- -- -- 0.101 21.4 -- -- -- --
111 0.491 2.98 -0.233 -- 0.443 -- -- 0.13 -- 0.4099 703 -- --
111.83 0.493 2.98 -- 0.0992 0.433 -- -- 0.154 21.2 0.5063 703 -- --
112.37 0.495 2.99 -0.187 -- -- -- -- 0.101 -- -- -- -- --
113.13 0.498 2.98 -- 0.0533 -- -- -- 0.122 21.1 -- -- -- --
112.36 0.494 2.98 -- -- 0.359 -- -- 0.15 -- 0.5 703 -- --
113.3 0.497 2.98 -- -- -- -- -- 0.122 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.75 wind 1.0 90 < th dose independent rect. 16 1
2 98.75 wind 1.0 90 < th dose dependent rect. 16 1
18 105.36 humidity 90.0 270 > th dose independent rect. 14 1
21 105.36 humidity 90.0 270 > th dose dependent rect. 14 1
25 105.40 precipitation 0.1 270 > th dose independent rect. 14 2
26 105.40 precipitation 0.1 270 > th dose dependent rect. 14 2
37 105.94 humidity 90.0 270 > th dose dependent rect. 12 4
43 106.15 humidity 90.0 270 > th dose independent rect. 12 4
55 106.65 atmosphere 995.0 720 > th dose independent rect. 23 16
58 106.72 atmosphere 1005.0 270 < th dose dependent rect. 16 1
60 106.80 temperature 10.0 720 > th dose independent rect. 15 8
61 106.80 atmosphere 995.0 720 > th dose independent rect. 15 8
62 106.80 temperature 10.0 720 > th dose independent rect. 23 16
64 106.86 temperature 10.0 720 > th dose independent rect. 3 8
65 106.86 atmosphere 995.0 720 > th dose independent rect. 3 8
66 106.86 temperature 10.0 720 > th dose independent rect. 11 16
67 106.88 atmosphere 995.0 720 > th dose independent rect. 11 16
68 106.91 humidity 50.0 720 > th dose independent rect. 3 8
72 107.04 wind 3.0 720 > th dose independent rect. 14 1
73 107.05 precipitation 0.1 720 < th dose independent rect. 15 8
75 107.05 precipitation 0.1 720 < th dose dependent rect. 15 8
76 107.14 wind 3.0 90 < th dose independent rect. 2 1
84 107.23 wind 1.0 720 > th dose dependent rect. 14 1
85 107.30 wind 9.0 720 < th dose independent rect. 15 6
86 107.30 wind 9.0 720 < th dose independent rect. 15 22
87 107.32 wind 5.0 90 < th dose dependent rect. 2 1
88 107.32 humidity 80.0 30 < th dose dependent rect. 19 1
96 107.40 wind 9.0 720 < th dose independent rect. 3 8
103 107.48 atmosphere 1000.0 90 > th dose dependent rect. 2 1
116 107.60 humidity 90.0 30 > th dose dependent rect. 2 1
120 107.61 precipitation 0.1 720 < th dose independent rect. 11 16
121 107.61 precipitation 0.1 720 < th dose dependent rect. 11 16
122 107.63 humidity 60.0 90 > th dose dependent rect. 2 1
123 107.64 wind 9.0 720 < th dose independent rect. 15 8
127 107.67 atmosphere 995.0 90 > th dose independent rect. 3 23
130 107.68 humidity 90.0 10 > th dose independent rect. 2 1
131 107.68 temperature 25.0 30 > th dose independent rect. 20 3
134 107.69 atmosphere 1015.0 720 < th dose dependent rect. 11 1
138 107.71 wind 9.0 720 < th dose independent rect. 9 18
140 107.72 atmosphere 1000.0 90 > th dose independent rect. 2 1
143 107.74 temperature 10.0 90 > th dose independent rect. 2 1
145 107.74 temperature 30.0 90 < th dose independent rect. 2 1
146 107.74 humidity 50.0 90 > th dose independent rect. 2 1
150 107.74 atmosphere 1010.0 90 < th dose independent rect. 2 1
152 107.74 radiation 1.0 90 < th dose independent rect. 2 1
157 107.74 precipitation 0.1 90 < th dose independent rect. 2 1
158 107.74 temperature 10.0 90 > th dose independent rect. 3 23
160 107.74 radiation 1.0 90 < th dose dependent rect. 2 1
165 107.74 precipitation 0.1 90 < th dose dependent rect. 2 1
167 107.76 precipitation 0.1 10 < th dose independent rect. 3 23
168 107.76 temperature 30.0 30 < th dose dependent rect. 2 1
171 107.76 precipitation 0.1 10 < th dose dependent rect. 3 23
178 107.77 atmosphere 1010.0 30 < th dose dependent rect. 2 1
218 107.79 temperature 10.0 30 > th dose dependent rect. 2 1
228 107.81 wind 1.0 30 > th dose independent rect. 2 1
276 107.85 atmosphere 1015.0 720 < th dose dependent rect. 9 3
300 107.95 temperature 25.0 90 > th dose dependent rect. 20 3
309 107.98 wind 9.0 720 < th dose independent rect. 19 8
311 107.98 atmosphere 995.0 720 > th dose dependent rect. 13 2
312 107.99 atmosphere 995.0 720 > th dose independent rect. 7 8
314 107.99 radiation 1.0 14400 < th dose dependent rect. 3 1
316 108.00 precipitation 0.1 720 < th dose independent rect. 3 8
318 108.00 radiation 40.0 14400 < th dose dependent rect. 23 1
322 108.00 precipitation 0.1 720 < th dose dependent rect. 3 8
335 108.05 atmosphere 995.0 720 > th dose independent rect. 3 22
349 108.07 wind 9.0 1440 < th dose independent rect. 3 1
350 108.07 temperature 10.0 1440 > th dose independent rect. 3 1
353 108.07 temperature 25.0 10 > th dose independent rect. 22 1
355 108.07 temperature 30.0 1440 < th dose independent rect. 3 1
359 108.07 humidity 50.0 1440 > th dose independent rect. 3 1
368 108.07 atmosphere 995.0 1440 > th dose independent rect. 3 1
369 108.07 radiation 1.0 1440 < th dose independent rect. 3 1
389 108.07 atmosphere 995.0 720 > th dose independent rect. 13 2
390 108.07 atmosphere 995.0 720 > th dose independent rect. 3 16
391 108.07 temperature 10.0 1440 > th dose independent rect. 4 23
405 108.08 wind 9.0 1440 < th dose independent rect. 23 1
406 108.08 temperature 10.0 1440 > th dose independent rect. 23 1
409 108.08 temperature 30.0 1440 < th dose independent rect. 23 1
413 108.08 humidity 50.0 1440 > th dose independent rect. 23 1
423 108.08 atmosphere 995.0 1440 > th dose independent rect. 23 1
424 108.08 radiation 1.0 1440 < th dose independent rect. 23 1
445 108.08 temperature 10.0 1440 > th dose independent rect. 24 23
448 108.08 radiation 1.0 1440 < th dose dependent rect. 23 1
458 108.09 temperature 10.0 720 > th dose independent rect. 7 8
459 108.09 atmosphere 1015.0 720 < th dose independent rect. 7 8
460 108.09 temperature 10.0 720 > th dose independent rect. 15 16
461 108.09 temperature 25.0 30 > th dose dependent rect. 22 1
467 108.10 atmosphere 995.0 720 > th dose independent rect. 15 16
468 108.11 precipitation 0.1 720 < th dose independent rect. 13 2
469 108.11 wind 9.0 720 < th dose independent rect. 15 16
470 108.11 precipitation 0.1 720 < th dose dependent rect. 13 2
472 108.12 wind 3.0 30 < th dose independent rect. 22 1
475 108.13 temperature 10.0 720 > th dose independent rect. 19 8
476 108.13 temperature 30.0 720 < th dose independent rect. 19 8
477 108.13 humidity 50.0 720 > th dose independent rect. 19 8
478 108.13 atmosphere 995.0 720 > th dose independent rect. 19 8
479 108.13 radiation 1.0 720 < th dose independent rect. 19 8
484 108.13 temperature 10.0 720 > th dose independent rect. 3 16
485 108.13 atmosphere 1005.0 30 > th dose dependent rect. 22 1
488 108.13 radiation 1.0 720 < th dose dependent rect. 19 8
494 108.14 humidity 90.0 30 < th dose independent rect. 22 1
498 108.15 temperature 10.0 720 > th dose independent rect. 13 2
499 108.15 atmosphere 1015.0 720 < th dose independent rect. 13 2
500 108.15 precipitation 0.1 720 < th dose independent rect. 23 16
501 108.15 temperature 10.0 720 > th dose independent rect. 15 22
503 108.15 precipitation 0.1 720 < th dose dependent rect. 23 16
504 108.16 atmosphere 1005.0 30 > th dose independent rect. 22 1
505 108.16 atmosphere 995.0 720 > th dose independent rect. 15 22
506 108.16 wind 5.0 30 < th dose dependent rect. 22 1
510 108.17 wind 9.0 720 < th dose independent rect. 1 2
511 108.17 temperature 10.0 720 > th dose independent rect. 1 2
512 108.17 temperature 30.0 720 < th dose independent rect. 1 2
513 108.17 humidity 50.0 720 > th dose independent rect. 1 2
516 108.17 atmosphere 995.0 720 > th dose independent rect. 1 2
517 108.17 radiation 1.0 720 < th dose independent rect. 1 2
522 108.17 atmosphere 995.0 720 > th dose independent rect. 21 18
524 108.17 radiation 1.0 720 < th dose dependent rect. 1 2
530 108.18 precipitation 0.1 720 < th dose independent rect. 1 2
533 108.18 precipitation 0.1 720 < th dose dependent rect. 1 2
537 108.19 humidity 80.0 30 > th dose independent rect. 22 1
546 108.21 humidity 90.0 30 < th dose independent rect. 19 4
550 108.22 wind 1.0 30 > th dose independent rect. 22 1
552 108.22 precipitation 0.1 30 < th dose independent rect. 22 1
553 108.22 precipitation 0.1 30 < th dose dependent rect. 22 1
556 108.23 temperature 10.0 30 > th dose independent rect. 22 1
558 108.23 temperature 30.0 30 < th dose independent rect. 22 1
559 108.23 humidity 50.0 30 > th dose independent rect. 22 1
562 108.23 atmosphere 995.0 30 > th dose independent rect. 22 1
564 108.23 atmosphere 1010.0 30 < th dose independent rect. 22 1
566 108.23 radiation 1.0 30 < th dose independent rect. 22 1
572 108.23 temperature 10.0 30 > th dose independent rect. 23 23
573 108.23 radiation 1.0 30 < th dose dependent rect. 22 1
581 108.25 humidity 90.0 30 < th dose dependent rect. 22 1
584 108.26 humidity 50.0 30 > th dose dependent rect. 22 1
588 108.27 temperature 10.0 720 > th dose independent rect. 15 6
589 108.27 temperature 10.0 720 > th dose independent rect. 21 18
590 108.27 wind 9.0 30 < th dose independent rect. 3 23
593 108.28 precipitation 0.1 720 < th dose independent rect. 15 6
594 108.28 precipitation 0.1 720 < th dose dependent rect. 15 6
599 108.31 wind 9.0 720 < th dose independent rect. 3 6
600 108.31 temperature 10.0 720 > th dose independent rect. 3 6
601 108.31 humidity 50.0 720 > th dose independent rect. 3 6
602 108.31 atmosphere 995.0 720 > th dose independent rect. 3 6
603 108.31 precipitation 0.1 720 < th dose independent rect. 19 8
604 108.31 temperature 10.0 720 > th dose independent rect. 9 18
605 108.31 precipitation 0.1 720 < th dose independent rect. 15 22
607 108.31 precipitation 0.1 720 < th dose dependent rect. 19 8
608 108.31 precipitation 0.1 720 < th dose dependent rect. 15 22
615 108.34 atmosphere 1015.0 720 < th dose independent rect. 15 6
617 108.34 atmosphere 1015.0 30 < th dose dependent rect. 22 1
619 108.35 atmosphere 995.0 720 > th dose independent rect. 15 6
628 108.38 atmosphere 995.0 720 > th dose independent rect. 9 18
632 108.39 wind 1.0 10 > th dose independent rect. 23 12
633 108.39 precipitation 0.1 720 < th dose independent rect. 9 18
634 108.39 precipitation 0.1 720 < th dose dependent rect. 9 18
635 108.40 humidity 90.0 720 < th dose independent rect. 13 2
637 108.40 atmosphere 1000.0 10 > th dose independent rect. 14 12
641 108.41 wind 9.0 720 < th dose independent rect. 15 12
660 108.45 humidity 50.0 720 > th dose independent rect. 13 2
661 108.45 precipitation 0.1 720 < th dose independent rect. 3 6
662 108.45 precipitation 0.1 720 < th dose independent rect. 7 8
666 108.45 precipitation 0.1 720 < th dose dependent rect. 3 6
667 108.45 precipitation 0.1 720 < th dose dependent rect. 7 8
668 108.46 atmosphere 995.0 10 > th dose dependent rect. 14 12
670 108.47 wind 9.0 720 < th dose independent rect. 13 2
671 108.47 wind 1.0 30 > th dose dependent rect. 22 1
675 108.48 temperature 30.0 720 < th dose independent rect. 3 6
676 108.48 temperature 30.0 90 < th dose independent rect. 1 22
680 108.49 atmosphere 1015.0 720 < th dose independent rect. 3 8
681 108.50 temperature 30.0 30 < th dose dependent rect. 22 1
686 108.51 wind 9.0 10 < th dose independent rect. 2 12
694 108.53 precipitation 0.1 10 < th dose independent rect. 14 12
698 108.53 precipitation 0.1 10 < th dose dependent rect. 14 12
700 108.55 temperature 30.0 720 < th dose independent rect. 15 6
701 108.55 atmosphere 1000.0 90 > th dose independent rect. 1 22
705 108.57 precipitation 0.1 720 < th dose independent rect. 3 22
708 108.57 precipitation 0.1 720 < th dose dependent rect. 3 22
709 108.58 humidity 50.0 720 > th dose independent rect. 21 18
710 108.58 precipitation 0.1 720 < th dose independent rect. 21 18
717 108.58 precipitation 0.1 720 < th dose dependent rect. 21 18
718 108.59 atmosphere 1000.0 90 > th dose independent rect. 13 12
723 108.61 precipitation 0.1 10 < th dose independent rect. 2 12
726 108.61 precipitation 0.1 10 < th dose dependent rect. 2 12
731 108.63 radiation 40.0 10 < th dose independent rect. 14 12
732 108.63 wind 1.0 720 > th dose independent rect. 12 13
735 108.64 wind 9.0 90 < th dose independent rect. 1 22
738 108.65 wind 1.0 10 > th dose independent rect. 23 23
742 108.66 wind 9.0 720 < th dose independent rect. 24 23
752 108.67 wind 3.0 720 > th dose independent rect. 12 6
753 108.67 temperature 10.0 10 > th dose independent rect. 2 12
755 108.67 temperature 10.0 10 > th dose independent rect. 14 12
756 108.67 atmosphere 995.0 10 > th dose independent rect. 2 12
758 108.67 atmosphere 1015.0 10 < th dose independent rect. 2 12
764 108.68 wind 9.0 720 < th dose independent rect. 11 16
771 108.69 wind 9.0 720 < th dose independent rect. 24 21
793 108.72 temperature 10.0 720 > th dose dependent rect. 11 1
826 108.74 radiation 40.0 720 < th dose independent rect. 15 8
829 108.74 wind 9.0 720 < th dose dependent rect. 15 3
832 108.75 wind 9.0 90 < th dose independent rect. 1 12
833 108.75 precipitation 0.1 720 < th dose independent rect. 15 16
836 108.75 precipitation 0.1 720 < th dose dependent rect. 15 16
845 108.78 precipitation 0.1 90 < th dose independent rect. 1 22
849 108.78 precipitation 0.1 90 < th dose dependent rect. 1 22
853 108.79 humidity 50.0 10 > th dose independent rect. 14 12
867 108.80 temperature 10.0 90 > th dose independent rect. 1 22
868 108.80 atmosphere 995.0 30 > th dose independent rect. 23 23
905 108.81 atmosphere 995.0 30 > th dose dependent rect. 3 23
908 108.83 wind 9.0 720 < th dose independent rect. 11 1
909 108.83 temperature 30.0 10 < th dose independent rect. 2 12
915 108.83 wind 9.0 720 < th dose dependent rect. 15 6
919 108.83 wind 9.0 10 < th dose dependent rect. 16 12
922 108.84 temperature 30.0 90 < th dose independent rect. 1 13
924 108.84 atmosphere 1015.0 90 < th dose independent rect. 1 22
928 108.84 atmosphere 995.0 720 > th dose dependent rect. 4 11
932 108.85 radiation 40.0 720 < th dose independent rect. 3 6
935 108.85 wind 1.0 720 > th dose independent rect. 4 20
943 108.86 humidity 50.0 90 > th dose independent rect. 1 22
944 108.86 precipitation 0.1 30 < th dose independent rect. 23 23
952 108.86 precipitation 0.1 30 < th dose dependent rect. 23 23
957 108.87 humidity 50.0 720 > th dose independent rect. 23 16
966 108.88 temperature 30.0 720 < th dose independent rect. 16 11
967 108.88 atmosphere 1000.0 720 > th dose independent rect. 1 11
975 108.89 atmosphere 1000.0 720 > th dose independent rect. 24 13
976 108.89 humidity 50.0 30 > th dose independent rect. 3 23
984 108.90 humidity 50.0 720 > th dose dependent rect. 1 2
1000 108.92 humidity 50.0 90 > th dose independent rect. 1 12